Pairwise Alignments

Query, 230 a.a., putative Transcriptional regulator PfeR from Pseudomonas putida KT2440

Subject, 225 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  134 bits (337), Expect = 1e-36
 Identities = 89/221 (40%), Positives = 118/221 (53%), Gaps = 2/221 (0%)

Query: 3   TSLLLAEDDPRLLQDLDRHFRNRGFLVHACASGTQALNAIQQSQFELVLLDIMLPGIDGL 62
           + LLL +DD  L + L       GF V AC  G  A  A+ +     V+LD+MLP   GL
Sbjct: 2   SELLLIDDDQELCELLGSWLTQEGFSVRACHDGQSARLALAEHAPAAVVLDVMLPDGSGL 61

Query: 63  SLLDALRRQQA-VPVMLMSALGAEQDRISGFTRGADDYLPKPFSLAELDARVDALLRRVA 121
            LL  LR + A +PV+++SA G   DRI G   GADDYL KP    EL AR+ A+LRR +
Sbjct: 62  ELLKQLRSEHAELPVLMLSARGEPLDRILGLELGADDYLAKPCDPRELTARLRAVLRR-S 120

Query: 122 FDRGTALRADVGEVMLDHDRQDVIHNGNAAGLTASEFRLLVTLLAHPDEALSKPFLYQTV 181
               T  + ++G+++    R     +G    LT SE R+L  LL  P E L K  L Q  
Sbjct: 121 HPTATTSQMELGDLVYSPARGVASIDGREMTLTLSESRILEALLRQPGEPLDKQELAQIG 180

Query: 182 LHRAYTRLDRGLDVHVCNLRRKLADINAQHLQIQAVRGQGY 222
           L R  T  DR LD+HV NLR+K+        +I A+R +GY
Sbjct: 181 LGRKLTLYDRSLDMHVSNLRKKIGPHADGRPRIVALRSRGY 221