Pairwise Alignments

Query, 230 a.a., putative Transcriptional regulator PfeR from Pseudomonas putida KT2440

Subject, 222 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  130 bits (326), Expect = 3e-35
 Identities = 88/222 (39%), Positives = 120/222 (54%), Gaps = 11/222 (4%)

Query: 5   LLLAEDDPRLLQDLDRHFRNRGFLVHACASGTQALNAIQQSQFELVLLDIMLPGIDGLSL 64
           LLL ED+  L  +L    + +G+ V   A G  A+   Q   ++L++LD+ LPG+ GL +
Sbjct: 3   LLLVEDNVPLADELTAGLQRQGYAVDWLADGRDAVYQGQSEPYDLIILDLGLPGLPGLDV 62

Query: 65  LDALRRQQ-AVPVMLMSALGAEQDRISGFTRGADDYLPKPFSLAELDARVDALLRRVAFD 123
           L   R    A PV++++A G+  +RI G   GADDYL KPF   EL  R+ ALLRR    
Sbjct: 63  LAQWRAAGLATPVLILTARGSWAERIEGLKAGADDYLSKPFHPEELQLRIQALLRRA--- 119

Query: 124 RGTA--LRADVGEVMLDHDRQDVIHNGNAAGLTASEFRLLVTLLAHPDEALSKPFLYQTV 181
           RG A   + +   + LD  RQ V  +G    LTA+EFRLL   + HP + LSK  L + +
Sbjct: 120 RGLANQPKLEAAGLHLDESRQCVSRDGVDVQLTAAEFRLLRYFMLHPQQILSKSHLAEHL 179

Query: 182 LHRAYTRLDRGLDVHVCNLRRKLADINAQHLQIQAVRGQGYI 223
                 R    L+VHV +LRRKL         I+  RGQGYI
Sbjct: 180 YDGETERDSNVLEVHVNHLRRKLG-----RSVIETRRGQGYI 216