Pairwise Alignments

Query, 230 a.a., putative Transcriptional regulator PfeR from Pseudomonas putida KT2440

Subject, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  132 bits (331), Expect = 8e-36
 Identities = 86/228 (37%), Positives = 125/228 (54%), Gaps = 8/228 (3%)

Query: 4   SLLLAEDDPRLLQDLDRHFRNRGFLVHACASGTQALNAIQQSQFELVLLDIMLPGIDGLS 63
           S+L+ +DD  + + L  +    GF VHA A G    +A++ +  +LV+LD+MLP  DG S
Sbjct: 7   SILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDEDGFS 66

Query: 64  LLDALR---RQQAVPVMLMSALGAEQDRISGFTRGADDYLPKPFSLAELDARVDALLRRV 120
           L   +R   RQ  VP+++++A   E DR+ G   GADDYL KPFS  EL AR+ ALLRR 
Sbjct: 67  LCRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLRRT 126

Query: 121 AFDR---GTALRADVGEVMLDHDRQDVIH-NGNAAGLTASEFRLLVTLLAHPDEALSKPF 176
            F +   G A+ A   +  LD     + H +G    L+ ++F LL   L HP + L +  
Sbjct: 127 EFGQTAPGNAVLA-FDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQILDRDT 185

Query: 177 LYQTVLHRAYTRLDRGLDVHVCNLRRKLADINAQHLQIQAVRGQGYIL 224
           +      R    LDR +D+ V  LR++L D +     I+ VRG GY+L
Sbjct: 186 IGNATRGREPMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYLL 233