Pairwise Alignments

Query, 442 a.a., histidine kinase from Pseudomonas putida KT2440

Subject, 537 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  111 bits (277), Expect = 6e-29
 Identities = 88/282 (31%), Positives = 135/282 (47%), Gaps = 17/282 (6%)

Query: 167 LALLLGLALYRHLVV--PLNRLRDRADALRADDLDSPALP-LQERRDELGELAQAFEHMA 223
           LAL +G++LY    +  P+ RL   A+ +R       A+P L  R+DE+GEL+ A + M 
Sbjct: 245 LALTIGVSLYMAGTIARPIRRLALAAERVRHGQGRVHAIPDLSHRKDEIGELSVALKEMT 304

Query: 224 GRLRQSLEQQRLLLRTLSHELRTPLARLRIAHDSD--LPPPQLRERLDREVAD----MQK 277
             L + ++        ++HE++ PL  LR A ++   +  P  R RL   V D    + +
Sbjct: 305 EALWRRMDAIEAFAADVAHEIKNPLTSLRSAVETAARIEDPDKRARLMSIVLDDVGRLDR 364

Query: 278 LLENTLDLAWMDTEQPSLVTEPVLVLSVWEALCE---DVCFESGWDRARLPCSLGTDCLV 334
           L+ +  D + +D E     T PV + ++ + L E     C + G  R  +    G    V
Sbjct: 365 LISDISDASHIDAEMSRAETGPVALAAMLDTLAEIYRGTCEDRGL-RFEVERPEGDALTV 423

Query: 335 QAHLDSLAQALENLLRNAIRHSPTEGRVSLDGWREGACWHLRLSDQGPGVPDTDLERIFK 394
           Q     L Q L NL+ NA   SP  G + L   R+G    L + DQGPG+P   L+ IF+
Sbjct: 424 QGIESRLVQVLRNLIANAASFSPDGGLIRLAAHRDGGRIALVVEDQGPGIPANKLDAIFE 483

Query: 395 PYQRLAESGAGF----GLGLAIARRAIELQGGRLWASNGHPG 432
            +      G  F    GLGL+I+R+ +E  GG + A N   G
Sbjct: 484 RFYSERPEGEKFGTHSGLGLSISRQIVEAHGGAIRAENRDEG 525