Pairwise Alignments

Query, 295 a.a., farnesyl diphosphate synthase from Pseudomonas putida KT2440

Subject, 349 a.a., Geranylgeranyl diphosphate synthase from Xanthobacter sp. DMC5

 Score =  146 bits (368), Expect = 7e-40
 Identities = 114/280 (40%), Positives = 147/280 (52%), Gaps = 13/280 (4%)

Query: 10  QARVDAALEPLFIAPSKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAA 69
           +A VD  L  L    +     L+AAMR+ ++  GKR+RPLL  AA   L A         
Sbjct: 62  RAVVDRRLGLLVPPAASHPAVLHAAMRHILLAPGKRLRPLLVMAAAMQLDASEHAVLDFG 121

Query: 70  CAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFS-ALLDPC 128
           CA+E+IHA SL+ DDLP MDD  +RR QPTTH  + E  A+LA   L S +   A   P 
Sbjct: 122 CALEMIHASSLIIDDLPCMDDAMVRRAQPTTHVKYGEDVAVLAAVALLSRSLGVAGAAPG 181

Query: 129 LSPQIDSIRLAMVQVLAKAAGPAGMVGGQAIDL-GSVGQKLDQQALEFMHRHKTGALIEA 187
            S   D +RL  V +L+KA G  G+ GGQ  DL  S G+ L   A E ++R KTG L  A
Sbjct: 182 TS---DHVRLDAVCILSKAVGSLGLCGGQYDDLRPSPGRSL--AATEDVNRRKTGVLFSA 236

Query: 188 SVRLGALASARAEPVQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKP 247
           +V +   A+A A+  Q   L+  A  +G A+Q+ DDILD     A LGK  G D   +K 
Sbjct: 237 AVEIAGRAAA-ADEAQAGHLRALAGHVGSAYQILDDILDNSGSAAALGKDVGKD--ANKA 293

Query: 248 TYPALLGLEAAKAYAIELRDQALAALQGFG---EKAEPLR 284
           T  A LG   A+    E    ALAA +  G   E  +PLR
Sbjct: 294 TVIASLGAPRARKLLSEHLAGALAASKELGPNKEGQQPLR 333