Pairwise Alignments

Query, 295 a.a., farnesyl diphosphate synthase from Pseudomonas putida KT2440

Subject, 322 a.a., octaprenyl-diphosphate synthase from Pseudomonas simiae WCS417

 Score =  108 bits (271), Expect = 1e-28
 Identities = 81/252 (32%), Positives = 127/252 (50%), Gaps = 20/252 (7%)

Query: 37  YSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRG 96
           Y    GGKR+RPLL     +ALG   +     A  +E +H  +L+HDD+  +D   +RRG
Sbjct: 38  YITSAGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDV--VDMSGMRRG 95

Query: 97  QPTTHKAFDEACAILAGDGLQSLAFSALLDPCLSPQIDSIRLAMVQVLAKAAGPAGMVGG 156
           + T +  +  A ++L GD L S +F  +++    P +  +  A  +++A+         G
Sbjct: 96  RETANAMWGNAPSVLVGDFLYSRSFEMMVELGSMPVMKILSQA-TRIIAE---------G 145

Query: 157 QAIDLGSV--GQKLDQQALEFMHRHKTGALIEASVR-LGALASARAEPVQLDALQTYAQA 213
           + + L  V      ++  +E + R KT  L EAS     AL  A AE  Q +AL+T+   
Sbjct: 146 EVLQLSKVRDASTTEETYMEVI-RGKTAMLFEASTHSAAALCGATAE--QAEALRTFGDH 202

Query: 214 IGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKAYAIELRDQALAAL 273
           +G+AFQ+ DD+LD + D  TLGK  G D+A  KPT P +  +         L  +A+   
Sbjct: 203 LGVAFQLVDDLLDYKGDAETLGKNVGDDLAEGKPTLPLIYTMREGTPEQAALVRKAIQ-- 260

Query: 274 QGFGEKAEPLRA 285
           +G  E  E +RA
Sbjct: 261 KGGIEDLEAIRA 272