Pairwise Alignments

Query, 295 a.a., farnesyl diphosphate synthase from Pseudomonas putida KT2440

Subject, 307 a.a., (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) from Variovorax sp. SCN45

 Score =  257 bits (657), Expect = 2e-73
 Identities = 151/265 (56%), Positives = 180/265 (67%), Gaps = 11/265 (4%)

Query: 34  AMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDL 93
           AMRY+V++GGKR+RPLL  AA EA+G     A  AACA ELIHAYSLVHDDLP MD+D L
Sbjct: 47  AMRYAVLDGGKRLRPLLVLAASEAVGGNKAAALRAACATELIHAYSLVHDDLPCMDNDVL 106

Query: 94  RRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPCLSPQIDSIRLA----MVQVLAKAAG 149
           RRG+PT H  F EA A+LAGD LQ+LAF       L+P+ D I  A    + ++LA+AAG
Sbjct: 107 RRGKPTVHVKFGEADALLAGDALQALAFE-----LLTPEDDEIPAATQALLCRLLARAAG 161

Query: 150 PAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALIEASVRLGALASARAEPVQLDALQT 209
             GM GGQAIDL SVG  LD+  L  MHR KTGAL++ SV +GA A     P  L AL+ 
Sbjct: 162 SQGMAGGQAIDLASVGIALDETRLREMHRLKTGALLQGSVEMGA-ACGSVTPDALAALRD 220

Query: 210 YAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKAYAIELRDQA 269
           Y  AIGLAFQV DDILDV +D+ TLGK  G D A DKPTY +LLGL+ A+A A +L   A
Sbjct: 221 YGAAIGLAFQVVDDILDVTADSQTLGKTAGKDAAADKPTYVSLLGLDGARAQARQLLADA 280

Query: 270 LAALQGFG-EKAEPLRALARYIVER 293
           LAAL+  G      LRALA  +V+R
Sbjct: 281 LAALEKSGLADTSALRALAHMVVDR 305