Pairwise Alignments

Query, 295 a.a., farnesyl diphosphate synthase from Pseudomonas putida KT2440

Subject, 309 a.a., Octaprenyl diphosphate synthase (EC 2.5.1.90) from Variovorax sp. SCN45

 Score =  125 bits (314), Expect = 1e-33
 Identities = 83/238 (34%), Positives = 123/238 (51%), Gaps = 14/238 (5%)

Query: 36  RYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRR 95
           +Y +  GGKR+RP L      ALG   EQ    A  VE IH  +L+HDD+  +D+  LRR
Sbjct: 24  KYIISAGGKRLRPALLLLMSGALGYTGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRR 81

Query: 96  GQPTTHKAFDEACAILAGDGLQSLAFSALLDPCLSPQIDSIRLAMVQVLAKAAGPAGMVG 155
           G+ T +++F    ++L GD L S AF  +LD        +  + ++Q+LA+A     +  
Sbjct: 82  GRATANESFGNPASVLVGDFLYSRAFQMMLD--------ANNMRVMQILAEATNV--IAE 131

Query: 156 GQAIDLGSVGQ-KLDQQALEFMHRHKTGALIEASVRLGALASARAEPVQLDALQTYAQAI 214
           G+ + L ++    LD+ A   + R KT  L EAS RL A+ +     V+ +A  TY QA+
Sbjct: 132 GEVLQLMNMHDASLDEAAYLRVIRSKTAKLFEASTRLAAVLAGTTPEVE-EACATYGQAL 190

Query: 215 GLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKAYAIELRDQALAA 272
           G AFQV DD+LD   D    GK  G D+   K T P +  ++       +L   A+ A
Sbjct: 191 GTAFQVIDDVLDYAGDANETGKNVGDDLREGKTTLPLIFAMQRGTPAQSQLVRAAIEA 248