Pairwise Alignments

Query, 321 a.a., transposase from Pseudomonas putida KT2440

Subject, 302 a.a., IS110 family transposase from Erwinia tracheiphila SCR3

 Score = 70.5 bits (171), Expect = 5e-17
 Identities = 68/263 (25%), Positives = 108/263 (41%), Gaps = 20/263 (7%)

Query: 34  NTPKAIKAWLKTL---PKGSALAIEATSTYHMEMAEQAHAAGFAVYVIDGLRLSKYRESV 90
           N   A+  W+      P    + +EAT  YH  +A   + AG  V + +  R  ++   +
Sbjct: 36  NAADAVIGWISKQHCEPANVHIIMEATGVYHESLAYALYKAGAKVSLANPHRSREFARGM 95

Query: 91  AIRAKTDAHDAALLARFLSNERGSLKA---WTPPPAGHREIQVLLRRRAKLVAVRGMLRM 147
            I  K D  DA +LA +     G+LK    W PPP   R +  LLRRR   V      + 
Sbjct: 96  DILTKNDQVDAYMLACY-----GALKVPQPWVPPPENVRHLSALLRRRDAPVTDSTREKN 150

Query: 148 SLSGDKLFASEL---KRVEEVLERIELSLEKQLRAVIKKAGLSDQMRR----VQRLPGVG 200
            L   +   + L   + +E VL  +    E     ++       ++++    +  +  VG
Sbjct: 151 RLEKCRATDTPLAVTESIENVLRNLSAEPEHLDALILTHLDQHPELKKDFDLLTSIKSVG 210

Query: 201 FLTAAGLVMSFMRGEFKNSDAFVAYLGMDVTVSQSG-KWAGRGKLSKRGDSEVRRLLYNA 259
           +     +++      F  ++   A+LG+      SG    G+ KLSK G  E+R  LY A
Sbjct: 211 YQLGLNMLVILRGHHFDTAEQVAAFLGVVRVEKYSGTSVRGKPKLSKIGPPEIRAKLYLA 270

Query: 260 SMSGSR-TATWKQYYAHHQARGK 281
           S+ G R     K  Y     RGK
Sbjct: 271 SLCGLRFNPVMKAMYERLCLRGK 293