Pairwise Alignments

Query, 236 a.a., putative ABC efflux transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 236 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Variovorax sp. SCN45

 Score =  135 bits (340), Expect = 7e-37
 Identities = 81/208 (38%), Positives = 119/208 (57%), Gaps = 12/208 (5%)

Query: 29  LDAGEALFLKGPSGSGKTTLLGLLGGVNVPVQGRIQLLGQDLGSLSQGARDRFRVDHTGY 88
           L A E   + G SGSGK+TLL ++ G++ P +G ++L G DL ++ +  R   R    G+
Sbjct: 36  LGARETAAIVGASGSGKSTLLSIIAGLDTPTRGTVRLAGDDLFAIDEDERAAVRAQRVGF 95

Query: 89  IFQQFNLLPFLSVRENVELPCRFSRSRKARAEQRHGSVDQAASTLLTHLGLGDPAMLARR 148
           +FQ F LL  LS  ENV LP   +  + AR         +AA+ +L  +GLG    L   
Sbjct: 96  VFQSFQLLGNLSALENVMLPLELANRKDAR---------KAATEMLGRVGLGQ--RLGHY 144

Query: 149 ADSLSIGQQQRVAAARALIGQPELVIADEPTSALDADTREAFIRLLFDECRAAGASLLFV 208
              LS G+QQRVA ARA + QP L++ADEPT +LD  T E  ++L+FD  R  G +L+ V
Sbjct: 145 PKVLSGGEQQRVALARAFVVQPALLLADEPTGSLDFATGEQVMKLMFDLNRELGTTLVLV 204

Query: 209 SHDQSLAPLFDRHLSLAELNRAAKPREA 236
           +HD+ +A   +R +++ E  R A   +A
Sbjct: 205 THDRGIADRCERRITI-EAGRVAGNEKA 231