Pairwise Alignments

Query, 421 a.a., putative ABC efflux transporter, permease protein from Pseudomonas putida KT2440

Subject, 414 a.a., multidrug ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 47.8 bits (112), Expect = 6e-10
 Identities = 79/360 (21%), Positives = 140/360 (38%), Gaps = 67/360 (18%)

Query: 91  QDPRVKWAIPISLGDSHRGYR--VMGTTTDYFSHYQYGR----RQHLQLSQGREFANDPF 144
           ++P+V  A+P +  D    Y+  +           Q G+     QH+   +  +     F
Sbjct: 86  KNPQVTAAVPFTQMDGMFSYKGAMQPIEISGIDPAQEGKVSIVAQHIVRGKLDDLKPGEF 145

Query: 145 EVVLGAEVAEALHYKLGDKLVLAHGVAAISLVKHDDKP----FTVVGVLKRTGTPVDRTL 200
            VV+G   A      +GDKL L   V  IS       P      VVG+ K  G  +D   
Sbjct: 146 GVVVGEITARRFRLNVGDKLTLI--VPEISTAPGGITPRMQRLNVVGIFK-VGAELD--- 199

Query: 201 HISLGGMEAIHIDWHNGVPARGAGRISAEQARTMDLQPAAITAFMLGLNSKIATFSLQRE 260
               G M  IH+               A+ A     QP  + +  L +    A   +  +
Sbjct: 200 ----GSMAMIHM---------------ADAAEIQHWQPNQVQSVRLAVKDLYAAPKVSSD 240

Query: 261 INEYRSEPLLAILPGVALQ---------ELWSLMGTAEQALFVVSLFVVLTGLIGMLTAI 311
           I         A   G A +          L+S M   +  + ++ L +V      ++  +
Sbjct: 241 I---------AASLGAAYKPDDWTHTQGSLFSAMKMEKTMIGLLLLMIVAVAAFNIIATL 291

Query: 312 LTSLNERRREMAILRSVGARPWHIAGLLVLEALSLASVGIVAG--LGLLYA-GIALAQGY 368
           +  +N++  ++AILR++GA P  I  + +++   +  VG + G  LG++ A  ++   G+
Sbjct: 292 IMVVNDKGADIAILRTIGATPRQIMAIFMVQGTVIGIVGTLIGGVLGVIAALNVSELVGW 351

Query: 369 VQANYG-------LYLPLALPSTHEWTLLAIILGAALLMGSV----PAWRAYRQSLADGL 417
           V+   G       +Y    LPS  +   + +I  A  ++  +    PA+RA +   A  L
Sbjct: 352 VERVTGQHIFSSDVYFVSNLPSELQGGDVVLICTAGFVLSFLATLYPAYRAAKIEPAHAL 411