Pairwise Alignments

Query, 421 a.a., putative ABC efflux transporter, permease protein from Pseudomonas putida KT2440

Subject, 402 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 50.4 bits (119), Expect = 9e-11
 Identities = 97/433 (22%), Positives = 174/433 (40%), Gaps = 60/433 (13%)

Query: 5   RLALASLANRRFTAFLTAFAIALSVCLLLAVERVRTEARASFASTIS--GTDLIV----- 57
           RLAL +++     +FLT   + + V  ++A+  +         S +S  GT+++      
Sbjct: 7   RLALRAISRNLLRSFLTVLGVVIGVAAVIAMVTIGNGTTEQVKSELSRLGTNMLFVRPGQ 66

Query: 58  -GARSGSVNLLLYS---VFRIGNATNNIRWDSFQHYAQDPRVKWAIPISLGDSHRGYRVM 113
            G    S     +    V  I N  + IR  + Q+ +       A  +  G  +    V+
Sbjct: 67  FGPGRASTEAKRFDDRDVEAIRNQISGIRAVAPQNRSS------AATVIFGGKNHQTSVI 120

Query: 114 GTTTDYFSHYQYGRRQHLQLSQGREFANDPFEVVLGAEVAEALHYKLGDKLVLAHGVAAI 173
           GTT DY         Q   ++ GR+F   P E   G ++   +   +  +L  A      
Sbjct: 121 GTTNDYLI------AQDWTIALGRDF--QPAED-RGGQIGCIIGETVRQELFGAENPVG- 170

Query: 174 SLVKHDDKPFTVVGVLKRTGTP-----VDRTLHISLGGMEAIHIDWHNGVPARGAGRISA 228
             ++  +    V+GVL R G        D T+ + L     IH     G     +  +SA
Sbjct: 171 QTIRVSNISCPVIGVLARKGQSGLGDDQDDTIIMPL----KIHQRRIGGTTTISSIMVSA 226

Query: 229 EQARTMDLQPAAITAFMLGLNSKIATFSLQREINEYRSEPLLAILPGVALQELWSLMGTA 288
           +      +  A + + +  L  +    ++ RE +++    +  I    A+    +L+   
Sbjct: 227 QDG----VSTAKVQSDLQNLLRERRRINIGRE-DDFTVNDMTQIAS--AMTGTTTLLTGL 279

Query: 289 EQALFVVSLFVVLTGLIGMLTAILTSLNERRREMAILRSVGARPWHIAGLLVLEALSLAS 348
             A+  VSL V   G IG++  +L S+ ER RE+ I  ++GA    +    ++EA+ L++
Sbjct: 280 LGAVAAVSLLV---GGIGIMNIMLVSVTERTREIGIRLAIGALEKQVLTQFLVEAVMLSA 336

Query: 349 ----VGIVAGLGLLYAGIALAQGYVQANYGLYLPLALPSTHEWTLLAIILGAALLMGSVP 404
               VGI+ GLGL Y+ ++           L +P     +  +   A      ++ G  P
Sbjct: 337 FGGIVGILTGLGLAYSVVSF----------LNVPFVTSPSIIFLAFAFSAAIGVIFGYFP 386

Query: 405 AWRAYRQSLADGL 417
           A RA   S  + L
Sbjct: 387 ARRAASLSPIEAL 399