Pairwise Alignments

Query, 265 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 267 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  128 bits (321), Expect = 1e-34
 Identities = 80/245 (32%), Positives = 125/245 (51%), Gaps = 13/245 (5%)

Query: 21  LILGAIAFVAGFVDSIAGGGGLFLVPGFLLVGMPPQVALGQEKLVSTLG----TLAAIRN 76
           ++L  +A  AGF+DSIAGGGGL  +P  +++G+ P   LG  KL +  G    TLA  R 
Sbjct: 10  IVLFCVAIFAGFIDSIAGGGGLITIPAMMIMGIAPLDTLGTNKLQAQFGSASATLAYARR 69

Query: 77  FLANSKMVWQVALVGVPFSLLGAYLGAHLIVSISQETVGKIILALIPLGILIFLTPKDRP 136
              N K    + L+ +   +LGA   A +   + +  +  +   LI + +   L P+   
Sbjct: 70  GHVNLKEQLPMGLMAMAGGMLGALTAAFVPADLLRTIMPFL---LITIALYFALKPQLSD 126

Query: 137 VEERELSSRMLF--TVVPLTCLAIGFYDGFFGPGTGSMFIIAFHYLLRMDLVSSSANSKT 194
           ++     +  +F   V PL    IGFYDG FGPG GS +++AF  L    ++ ++A++K 
Sbjct: 127 IDSHRRITPFVFGLMVAPL----IGFYDGVFGPGAGSFYMLAFVALAGFGMLKATAHTKL 182

Query: 195 FNFASNIGALVAFVSAGKVVYLLALPLVACNILGNHLGSSLALRKGNDVVRKALVFSMLC 254
            N  SN G  V F   G V++ L L +     +G  +GS  A++ G  ++R  LV S L 
Sbjct: 183 LNLGSNFGGFVVFAMGGAVLWKLGLAMGLGQFIGAQVGSRFAMKNGAKIIRPLLVVSCLA 242

Query: 255 LFTSL 259
           + T L
Sbjct: 243 MATKL 247



 Score = 26.9 bits (58), Expect = 4e-04
 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 4/114 (3%)

Query: 151 VPLTCLAI--GFYDGFFGPGTGSMFIIAFHYLLRMDLVSSSANSKTFNFASNIGALVAFV 208
           + L C+AI  GF D   G G G + I A   +    L +   N     F S   A +A+ 
Sbjct: 10  IVLFCVAIFAGFIDSIAGGG-GLITIPAMMIMGIAPLDTLGTNKLQAQFGS-ASATLAYA 67

Query: 209 SAGKVVYLLALPLVACNILGNHLGSSLALRKGNDVVRKALVFSMLCLFTSLGVK 262
             G V     LP+    + G  LG+  A     D++R  + F ++ +     +K
Sbjct: 68  RRGHVNLKEQLPMGLMAMAGGMLGALTAAFVPADLLRTIMPFLLITIALYFALK 121