Pairwise Alignments

Query, 474 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 469 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  110 bits (274), Expect = 1e-28
 Identities = 111/440 (25%), Positives = 202/440 (45%), Gaps = 46/440 (10%)

Query: 28  YLMIADALEQDIESGRLAEGDRLPTLKDLAEALNVTPGTVGRAYDEAAKRGLVAGEVGRG 87
           Y   AD + + I SG L  G R+P+++  ++   ++P TV +AY    +RGL+      G
Sbjct: 4   YEKFADDIAELIRSGVLGPGQRVPSVRYASQTYGISPSTVFQAYYLLERRGLIRARPRSG 63

Query: 88  TFVR-QLRQPLPAPSVPTPVAGESSQIDLS---------IIKPNDAHMSEW--------- 128
            FV      P   P V   V  ES+++D+S         I  PN                
Sbjct: 64  YFVNTHAPSPFSEPVVSEQVH-ESTEVDVSELVFSVLDSIKDPNTVPFGSAFPSPMLFPL 122

Query: 129 --LGTAISELAASSDLGQVLDYVTEGGHTSHKQAGATWIQRWLPDARWQQVVLTAGAQHG 186
             L  +++  +   D   V+  ++ G     +Q    ++   L     +++++T GA   
Sbjct: 123 PRLARSLASASREMDPRLVVTDMSPGNPQLRRQIALRYMVGGLM-LPMEELLITNGALEA 181

Query: 187 LLVAISSLSKSDDVVLCESLCYPGIISLAHSLGRRLRGVAMDEH---GLIPEALRAACLE 243
           L + + ++++  D+V  E+  +   + +   L  +L+ V +  H   G+   AL A  LE
Sbjct: 182 LNLCLQAVTEPGDLVAIEAPAFYACLQVLERL--KLKAVEIPVHPRDGIDLNAL-AQTLE 238

Query: 244 HRPSLLVC--VTTHQNPTNSIMPPARRQAIAEIAREFDLFIVDDDIYGFL---EPSPDYK 298
             P +  C  +T+ QNP  + +P A++QA+ E+ R   + +++DD+Y  L   + +P  K
Sbjct: 239 RYP-IKACWTMTSFQNPMGATLPEAKKQALVELLRGHQVPLIEDDVYAELYYGQQAP--K 295

Query: 299 PLAAYAPERSV-YLTSLSKSVLPALRIGYLYAP--PQTLSRLSSMVRSSVWMPSPLMAQL 355
           P  A+  E  V +  S +KS+ P  R+G++ A    Q + RL  M  +S+    P  A +
Sbjct: 296 PAKAFDTEGLVMHCGSFAKSLAPGYRVGWVAAGRFAQKVERLKLM--TSLCPSMPAQAAI 353

Query: 356 ASNLINSGKADQLVR----MQQQEAAARQHMAREILGQYKIRSQPHSFHIWLELPEPWTS 411
           A  L + G    L +    +++Q++A    +AR    Q ++      + +WLELPE   S
Sbjct: 354 ADYLQHGGYDRHLRKLRYALEEQQSAMLTAIARYFPAQTRVSQPAGGYFLWLELPEQTDS 413

Query: 412 DEFANLARDNGVTVVSGSQF 431
            +   +A   G+++  G  F
Sbjct: 414 LKLFQMALAQGISIAPGPIF 433