Pairwise Alignments

Query, 474 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 496 a.a., putative regulator from Pseudomonas putida KT2440

 Score =  110 bits (275), Expect = 1e-28
 Identities = 118/440 (26%), Positives = 202/440 (45%), Gaps = 45/440 (10%)

Query: 27  VYLMIADALEQDIESGRLAEGDRLPTLKDLAEALNVTPGTVGRAYDEAAKRGLVAGEVGR 86
           +YL +A+ L   I+ G    G RLP+++ L+E   V+  TV +AY      G+V+     
Sbjct: 23  LYLNLAEILGARIKQGLYRPGQRLPSVRALSEEHGVSLSTVQQAYRMLEDSGMVSPRPKS 82

Query: 87  GTFVRQLRQ--PLPAPSVPTPVAGESSQID--LSIIKPNDAHMSEWLGTAISELAASS-- 140
           G FV   RQ   LPA S P     + SQ +  L +++         LG  + ++ + +  
Sbjct: 83  GYFVSDQRQLPALPAVSRPAQRPVDISQWEQVLELVRSTPRQDVVQLGRGMPDIDSPTLK 142

Query: 141 ----DLGQV--------LDYVTEGGHTSHKQAGATWIQRWLPDARWQ----QVVLTAGAQ 184
                L Q+        L Y    G+ + ++     + R + D+  +     +V+T G  
Sbjct: 143 PLLRSLAQLSRRQDMPGLYYDNIHGNLALREQ----VARLMLDSGCRLGPADLVITTGCH 198

Query: 185 HGLLVAISSLSKSDDVVLCESLCYPGIISLAHSLGRRLRGVAMDE-HGLIPEALRAACLE 243
             L  +I ++ +  D+V  +S  + G +     LG +   +  D   G+  EAL  A LE
Sbjct: 199 EALSCSIRAVCEPGDIVAVDSPSFHGAMQTLKGLGMKALEIPTDPVTGISLEALELA-LE 257

Query: 244 HRPSLLVCVTTH-QNPTNSIMPPARRQAIAEIAREFDLFIVDDDIYGFLEPS-PDYKPLA 301
             P  L+ +T    NP   IMP AR++A+  +A+ +D+ I++DD+YG L  + P  + L 
Sbjct: 258 QWPIKLIQITPSCNNPLGYIMPEARKKALLSLAQRYDVAILEDDVYGDLAYTYPRPRTLK 317

Query: 302 AYAPERSVYL-TSLSKSVLPALRIGYLYAPPQTLSRLSSMVRSSVWMPSPLMAQLASNLI 360
           ++  +  V L +S SK++ P LRIG++ AP + L R+  M   S    +       ++ I
Sbjct: 318 SFDDDGRVLLCSSFSKTLAPGLRIGWV-APGRYLERVLHMKYISTGSTASQPQLAIADFI 376

Query: 361 NSGKADQLVRMQQQEAAARQHMAREILGQYKIR--------SQPH-SFHIWLELPEPWTS 411
            +G     VR  +    ++    R+++G +  R        S+P   F +W+ELPE   +
Sbjct: 377 AAGHYQPHVRRMR----SQYQRGRDLMGDWVTRYFPAGTRVSRPQGGFMLWVELPEHLDT 432

Query: 412 DEFANLARDNGVTVVSGSQF 431
                   + GV V  GS F
Sbjct: 433 LRLNRALLEQGVQVAVGSIF 452