Pairwise Alignments

Query, 464 a.a., transporter of an unknown substrate from Pseudomonas putida KT2440

Subject, 404 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score = 84.7 bits (208), Expect = 5e-21
 Identities = 107/396 (27%), Positives = 168/396 (42%), Gaps = 31/396 (7%)

Query: 20  LALVFAFRMLGMFMVLPVLATYGMDLAGATPALIGLAIGAYGLTQAVLQIPFGMISDRIG 79
           L L+ A     + M LP L   G  L     A + +++ A+ L+    Q+ +G ISD +G
Sbjct: 13  LGLLSAIGPFAIDMYLPALPAIGQSLHADIGA-VQMSLTAFFLSLGAGQLLYGPISDMVG 71

Query: 80  RRPVIYLGLVIFALGSVLAAQADSIWGVIAGRILQGAGAISAAVMALLSDLTREQHRTKA 139
           R+P +Y GLV+FAL SV  A A  I  +I  R +QG GA  AA MA+   + R+ H    
Sbjct: 72  RKPPLYAGLVLFALASVGCAVATDIQTLIVLRFVQGLGA--AAGMAIPRAVVRDLHTGTD 129

Query: 140 MAMIGMSIGLSFAVAMVVGPLLTSAF----GLSGLFLVTAGLALVGILLIAFVVPSTHSI 195
            A +   + L F+V+ ++ PL  SA     G  G+F      A+ G+ ++  ++  T   
Sbjct: 130 AARLMSLLMLVFSVSPILAPLAGSAVIAFAGWRGVFWAVTIAAVAGLAMMVKLLDETRPA 189

Query: 196 LQHRES--GVARQAIGPTLRHPDLLRLDVSIFILHAVLMASFVAL---PLAFVERGGLPK 250
            +  ES  G A  A    LR    L L   +FI    +   F  L       ++  GL  
Sbjct: 190 SERVESSLGSALAAYWLLLRDRHYLGL---VFIGSFAMAGFFTYLANSSFVMIDHYGLSP 246

Query: 251 EQHWWVYLTALFISFFAMVPFIIY----GEKKRKMKRVLAGAVSVLLLTEIYFWEWADGL 306
                +Y  A  ++  A +    +    GE+   +  V  G V   +     F  +A G 
Sbjct: 247 A----MYSVAFGVNAAAFIAASQFTGSLGERYGLVNLVKFGVVCCGVAMVAMFIYFATGG 302

Query: 307 RGLVIGTVVFFTAFNLLEASLPS--LVSKVSPAGGKGTAMGVYSTSQFLGAALGGILGGW 364
             + +  V++F A   +   +P+  +++        GTA  +  T Q L  AL   + G 
Sbjct: 303 DNIWVLIVLYFIASGFMGLVIPTTGVLALEMHGAIAGTASALLGTLQMLTGALAMAVVG- 361

Query: 365 LFQHGGLNTVFLGSA-----VLCAIWLIVALRMNEP 395
           LF  G    +  G A      L   WL +    +EP
Sbjct: 362 LFTDGRPLPMVAGMAAGALIALVLTWLTLGGVRSEP 397



 Score = 41.2 bits (95), Expect = 6e-08
 Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 11/174 (6%)

Query: 19  GLALVFAFRMLGMFMVLPVLATYGMDLAGATPALIGLAIGAYGLTQAVLQIPFGMISDRI 78
           GL  + +F M G F  L   +   +D  G +PA+  +A G             G + +R 
Sbjct: 215 GLVFIGSFAMAGFFTYLANSSFVMIDHYGLSPAMYSVAFGVNAAAFIAASQFTGSLGERY 274

Query: 79  G-----RRPVIYLGLVIFALGSVLAAQADSIWGVIAGRILQGAGAISAAVMALLSDLTRE 133
           G     +  V+  G+ + A+    A   D+IW +I    +  A      V+     L  E
Sbjct: 275 GLVNLVKFGVVCCGVAMVAMFIYFATGGDNIWVLIVLYFI--ASGFMGLVIPTTGVLALE 332

Query: 134 QHRT---KAMAMIGMSIGLSFAVAMVVGPLLTSAFGLSGLFLVTAGLALVGILL 184
            H      A A++G    L+ A+AM V  L T    L  +  + AG AL+ ++L
Sbjct: 333 MHGAIAGTASALLGTLQMLTGALAMAVVGLFTDGRPLPMVAGMAAG-ALIALVL 385