Pairwise Alignments

Query, 464 a.a., transporter of an unknown substrate from Pseudomonas putida KT2440

Subject, 389 a.a., Drug resistance transporter, Bcr/CflA family from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 94.7 bits (234), Expect = 5e-24
 Identities = 56/163 (34%), Positives = 93/163 (57%), Gaps = 3/163 (1%)

Query: 20  LALVFAFRMLGMFMVLPVLATYGMDLAGATPALIGLAIGAYGLTQAVLQIPFGMISDRIG 79
           L    AF +L M + +P +  +G  + G++ A + L    Y +    LQ+ +G +SDR+G
Sbjct: 5   LVAQLAFGLLAMTICIPSMQQWGA-IFGSSQAAVQLTFSGYVVAYGGLQLLYGPLSDRLG 63

Query: 80  RRPVIYLGLVIFALGSVLAAQADSIWGVIAGRILQGAGAISAAVM--ALLSDLTREQHRT 137
           R+ ++ LG+ +  LGS+LAA A  +  + A R+LQGAG  +  V+  A++ DL     RT
Sbjct: 64  RKKILLLGIALGLLGSLLAALAGDLVMLTAARVLQGAGCAAGMVVGRAMVQDLFDGPERT 123

Query: 138 KAMAMIGMSIGLSFAVAMVVGPLLTSAFGLSGLFLVTAGLALV 180
           + MA IGM++GL   +A ++G  L    G    F++  GL++V
Sbjct: 124 RVMAYIGMAMGLVPPLATIIGGQLHVRLGWQANFVLLTGLSIV 166



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 26/148 (17%)

Query: 39  ATYGMDLAGATPALIGLAIGAYGLTQAVLQIPFGMI---------SDRIGRRPVIYLGLV 89
           AT+   LAGA   L    +G  G+   ++ +P   I           R+G R V+ LG  
Sbjct: 218 ATFYAFLAGAPIVLGSYGVGPAGIGYHIMVVPLAYIVGNYLTTHLVHRLGERTVMRLG-- 275

Query: 90  IFALGSVLAAQADSIWGVIAGRILQGAGAISAAVMALLSDLTREQH----RTKAMAMIGM 145
                     Q  S+ G+     L  AG  +   ++L   L    H        +  +G+
Sbjct: 276 ----------QGSSLLGIGLMLALALAGVDTPLALSLPLLLLGMGHGLLVPPTLIGTVGL 325

Query: 146 SIGLSFAVAMVVGPLLTSAFGLSGLFLV 173
              L+ A A V G L+    G  G F+V
Sbjct: 326 LPALAGAAAAVAG-LMQQLMGALGGFVV 352