Pairwise Alignments

Query, 237 a.a., 30S ribosomal subunit protein S3 from Pseudomonas putida KT2440

Subject, 233 a.a., 30S ribosomal protein S3 from Escherichia coli ECRC101

 Score =  328 bits (840), Expect = 7e-95
 Identities = 166/230 (72%), Positives = 187/230 (81%), Gaps = 2/230 (0%)

Query: 10  MGQKVHPTGIRLGIVKEHTSVWYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRP 69
           MGQKVHP GIRLGIVK   S W+A+   +AD L  D K R+YL  +L  ASVSRI I RP
Sbjct: 1   MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60

Query: 70  AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 129
           A++ R+TIHTARPGIVIGKKGEDVEKLR+ +    GVP  INI E+RKPELDA LVA S+
Sbjct: 61  AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120

Query: 130 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 189
             QLERRVMFRRAMKRAVQNAMR+GAKGIK++VSGRLGGAEIARTEWYREGRVPLHTLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180

Query: 190 DIDYNTYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPA--PRKKAAK 237
           DIDYNT EAHTTYGVIGVKVWIFKGE++GG     +P+ PA  P+K+  K
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230