Pairwise Alignments

Query, 177 a.a., transcription antipausing factor NusG from Pseudomonas putida KT2440

Subject, 176 a.a., Transcription termination/antitermination protein NusG from Xanthobacter sp. DMC5

 Score =  211 bits (537), Expect = 5e-60
 Identities = 104/177 (58%), Positives = 137/177 (77%), Gaps = 1/177 (0%)

Query: 1   MAKRWYVVHAYSGYEKHVMRSLIERVKLAGMEDGFGEILVPTEEVVEMRNGQKRKSERKF 60
           MAKRWY+VHAYS +EK V  S+ E+    G+ D F +ILVPTE+VVE+R G+K  +ERKF
Sbjct: 1   MAKRWYIVHAYSNFEKKVADSIREQADQRGLTDLFEQILVPTEKVVEVRRGRKVDTERKF 60

Query: 61  FPGYVLVQMEMNEGTWHLVKDTPRVMGFIGGTADKPAPITDKEAEAILRRVADGSDKPKP 120
           FPGYVLV+M++ +  +HL+K+TP+V GF+G   +KP PI++ EA  IL++V +G ++PKP
Sbjct: 61  FPGYVLVKMDLTDEAFHLIKNTPKVTGFLGAD-NKPMPISESEAMRILQQVQEGIERPKP 119

Query: 121 KTLFEPGEVVRVIDGPFADFNGSVEEVNYEKSRLQVAVLIFGRSTPVELEFSQVEKV 177
              +E GE V+V DGPFA FNG VEEV+  +SRL+VAV IFGR+TPVELEF QVEKV
Sbjct: 120 SISYEVGETVKVSDGPFASFNGIVEEVDDSRSRLKVAVSIFGRATPVELEFGQVEKV 176