Pairwise Alignments

Query, 177 a.a., transcription antipausing factor NusG from Pseudomonas putida KT2440

Subject, 203 a.a., Transcription antitermination protein NusG from Variovorax sp. SCN45

 Score =  237 bits (605), Expect = 8e-68
 Identities = 112/173 (64%), Positives = 142/173 (82%)

Query: 4   RWYVVHAYSGYEKHVMRSLIERVKLAGMEDGFGEILVPTEEVVEMRNGQKRKSERKFFPG 63
           RWYVVHAYSG EK V R++ ER+  AGM+D FG ILVPTEEVVE++NGQKR +ER+FFPG
Sbjct: 30  RWYVVHAYSGMEKAVERNITERINRAGMQDKFGRILVPTEEVVEIKNGQKRTTERRFFPG 89

Query: 64  YVLVQMEMNEGTWHLVKDTPRVMGFIGGTADKPAPITDKEAEAILRRVADGSDKPKPKTL 123
           YVLV+M M++ +WHLVK T +V GF+GG  ++PAPI+ KE E I+ ++  G++KP+ K  
Sbjct: 90  YVLVEMIMDDESWHLVKHTNKVTGFVGGAKNRPAPISQKEVEDIVSQMQQGTEKPRHKVE 149

Query: 124 FEPGEVVRVIDGPFADFNGSVEEVNYEKSRLQVAVLIFGRSTPVELEFSQVEK 176
           F  GE VRV +GPF DFNG+VEEVNYEKS++ V+V+IFGR+TPVELEFSQVEK
Sbjct: 150 FTVGEFVRVKEGPFTDFNGTVEEVNYEKSKVSVSVMIFGRATPVELEFSQVEK 202