Pairwise Alignments

Query, 177 a.a., transcription antipausing factor NusG from Pseudomonas putida KT2440

Subject, 177 a.a., transcription termination/antitermination protein NusG from Magnetospirillum magneticum AMB-1

 Score =  227 bits (579), Expect = 7e-65
 Identities = 108/174 (62%), Positives = 139/174 (79%), Gaps = 1/174 (0%)

Query: 4   RWYVVHAYSGYEKHVMRSLIERVKLAGMEDGFGEILVPTEEVVEMRNGQKRKSERKFFPG 63
           RWYV+H YSG+EK V +S+ E+ +  GM + F +ILVPTEEVVE+R G K  +ERKFFPG
Sbjct: 5   RWYVIHVYSGFEKKVAQSIREQAEQKGMAEAFEQILVPTEEVVEVRRGAKVNAERKFFPG 64

Query: 64  YVLVQMEMNEGTWHLVKDTPRVMGFIGGTADKPAPITDKEAEAILRRVADGSDKPKPKTL 123
           YVLV+M + + TWHLVK+TP+V GF+GG   +P PIT++EAE I+++V +G ++PKP  +
Sbjct: 65  YVLVKMNLTDDTWHLVKNTPKVTGFLGGKG-RPVPITEREAERIIKQVQEGVERPKPSII 123

Query: 124 FEPGEVVRVIDGPFADFNGSVEEVNYEKSRLQVAVLIFGRSTPVELEFSQVEKV 177
           FE GE VRV DGPF  FNG VEEV+ EK+RL+VAV IFGRSTPVELE+SQVEK+
Sbjct: 124 FEVGEQVRVSDGPFTSFNGLVEEVDEEKARLKVAVSIFGRSTPVELEYSQVEKI 177