Pairwise Alignments

Query, 177 a.a., transcription antipausing factor NusG from Pseudomonas putida KT2440

Subject, 167 a.a., Transcription antiterminator from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 50.8 bits (120), Expect = 1e-11
 Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 12/138 (8%)

Query: 5   WYVVHAYSGYEKHVMRSLIERVKLAGMEDGFGEILVPTEEVVEMRNGQKRKSERKFFPGY 64
           WYV++     EK V + L E+   A          +P  E V   + +K+K +R  F GY
Sbjct: 7   WYVMYTAPRAEKRVAQRLEEKGVTA---------YLPMIEEVRQWSDRKKKVKRPLFNGY 57

Query: 65  VLVQMEMNEGTWHLVKDTPRVMGFIGGTADKPAPITDKEAEAILRRVADGSDKPKPKTLF 124
           + V+ + +   W  ++    V  F+  + D  A + D E EAI R V  G       T  
Sbjct: 58  IFVRSDKSR-LWEALQVQGAVK-FVNFSGDH-AVVRDSEIEAIKRIVETGVAVEVETTHI 114

Query: 125 EPGEVVRVIDGPFADFNG 142
           E G+ V++I GP   F G
Sbjct: 115 EEGQQVKIIGGPLQGFEG 132