Pairwise Alignments

Query, 177 a.a., transcription antipausing factor NusG from Pseudomonas putida KT2440

Subject, 185 a.a., transcription termination/antitermination factor NusG from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  145 bits (367), Expect = 3e-40
 Identities = 80/180 (44%), Positives = 112/180 (62%), Gaps = 8/180 (4%)

Query: 4   RWYVVHAYSGYEKHVMRSLIERVKLAGMEDGFGEILVPTEEVVEMRNGQKRKSERKFFPG 63
           +WYV+   +G EK     L   +    +ED   E+L+P+E+V EMRNG+KR  ER FFPG
Sbjct: 5   KWYVLRVVAGQEKKAKSYLDNEITRQKLEDYIPEVLIPSEKVYEMRNGKKRVRERNFFPG 64

Query: 64  YVLVQMEMNEG-TWHLVKDTPRVMGFI----GGTADKPAPITDKEAEAILRRVADGSDK- 117
           YVLV  +++ G   H++   P V+GF+    GG +  P P+   E   IL RV +G D+ 
Sbjct: 65  YVLVNADLSHGEANHVITSIPGVIGFLGANAGGASKTPEPLRQSEINRILGRV-EGIDEF 123

Query: 118 -PKPKTLFEPGEVVRVIDGPFADFNGSVEEVNYEKSRLQVAVLIFGRSTPVELEFSQVEK 176
             K  T +  GE ++V+DGPF+ F+G++EEV  +K +L V V IFGR+TPVEL F QVEK
Sbjct: 124 AEKLDTPYIVGETIKVMDGPFSGFSGTIEEVFEDKKKLNVMVKIFGRNTPVELNFMQVEK 183