Pairwise Alignments

Query, 475 a.a., Peptidase, M23/M37 family from Pseudomonas putida KT2440

Subject, 1092 a.a., IncF plasmid conjugative transfer protein TraG from Sphingobium sp. HT1-2

 Score = 86.7 bits (213), Expect = 4e-21
 Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 6/120 (5%)

Query: 318  ISSRFSA---GRKHPILNKI-RAHKGVDYAAPRGTPIKAAGDGRIELAG-RRGGYGNTVI 372
            IS R ++   GR  P+  +    H+GVD A   G PI A   GR+     +  G GN ++
Sbjct: 964  ISGRLTSNMGGRVDPVTGQPGHHHRGVDIAQRAGAPIPAPASGRVVKNDFQANGAGNYIV 1023

Query: 373  IQHGNRYKTLYGHMQGFAKGIKTGSTVKQGQIIGYIGTTGLSTGPHLHYEFQVNGVHVDP 432
            ++HG+  ++ Y HMQ  ++    GST++QG+I+G +G++G STGPHLHYE   +G  VDP
Sbjct: 1024 LEHGDGSQSKYFHMQDRSR-FPVGSTIEQGEILGRVGSSGKSTGPHLHYELWKDGAPVDP 1082



 Score = 26.2 bits (56), Expect = 0.006
 Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 21/126 (16%)

Query: 287 YTNKQGNTTYYTADG----------NSLRKAFIRTPVDFARISSRFSAGRKHPILNKIRA 336
           YTN  G  TY  ADG          ++L     RT    +++S   S G+ H    +  A
Sbjct: 503 YTNADGGITYGFADGSNAFDTRQGISNLSFTPTRTSGFDSQMSRALSEGQSHTQSLRNSA 562

Query: 337 HKGVDYAAPRGTPIKAAGDGRIELAGRRGGYGNTVIIQHGNRYKTLYGHMQGFAKGIKTG 396
            +  +  A   T + +A +       RRG    T     G+ +      M   ++ + +G
Sbjct: 563 SQSWNATATTATDLLSAAE------HRRGSSTET-----GSGFNNSVARMTDVSRSLSSG 611

Query: 397 STVKQG 402
            T K G
Sbjct: 612 LTSKFG 617