Pairwise Alignments

Query, 275 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 267 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

 Score =  149 bits (376), Expect = 6e-41
 Identities = 95/259 (36%), Positives = 142/259 (54%), Gaps = 4/259 (1%)

Query: 16  SLRILCGLILLFLIL----PVLVIVPLSFNSGSFLVYPLQGFSLQWYQDFFGSAEWMRAL 71
           S   L GL+ L  ++    P LVI+ LSF     L +P   +SL+WY     + E   AL
Sbjct: 9   SFNALFGLLSLISVIVLAGPTLVILILSFTGEEALHFPPASYSLRWYAALIDANELQAAL 68

Query: 72  KNSIIVAPAATVLAMVFGTLAAIGLTRGDFPGKSLVMALVISPMVVPVVIIGVASYLFFA 131
             S+ VA  +    +V G  AA+G+ R +      +  L +SP+++P +  G A+ + F+
Sbjct: 69  WVSLKVAVISVSACVVLGVAAALGIARSEGAVARGLETLFLSPLILPALAFGFAALMLFS 128

Query: 132 PLGMGNSFTSLILVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGASPLLAFRRVTLPL 191
            LGM  S  +L + H V+ VPFV+ T  A+L   +  L+ A+ SLGAS L  FR VTLPL
Sbjct: 129 ILGMRPSTLTLAIGHIVVCVPFVLRTTLASLAQLDPALLDASRSLGASRLHTFRTVTLPL 188

Query: 192 IAPGVISGALFAFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIAF 251
           I+PGV SGA  AF  SFD V V+LFL       LP  ++  I+  L    A+A  ++I  
Sbjct: 189 ISPGVASGAFIAFMASFDNVPVSLFLQDARTQVLPIYLWDIIQNQLDSRAASACGVIIIA 248

Query: 252 SVLLLLTLEWLRGRSEKLR 270
           +VL+++ +E + G S  ++
Sbjct: 249 TVLMMVLMERVAGFSRFMK 267