Pairwise Alignments

Query, 275 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 271 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

 Score =  157 bits (398), Expect = 2e-43
 Identities = 90/259 (34%), Positives = 146/259 (56%), Gaps = 4/259 (1%)

Query: 13  WFYSLRILCGLILLFLILPVLVIVPLSFNSGSFLVYPLQGFSLQWYQDFFGSAEWMRALK 72
           WF    I+ G    FL +P++++V  SFN+ S LV    GFS QWY     + + + A  
Sbjct: 7   WFNVTSIVLGFA--FLYIPIILLVIYSFNA-SRLVTVWAGFSTQWYWSLLENEQLIDAAW 63

Query: 73  NSIIVAPAATVLAMVFGTLAAIGLTR-GDFPGKSLVMALVISPMVVPVVIIGVASYLFFA 131
            ++ +A  ++++A V GT+AA+ LTR G F G++L   ++ +P+V+P VI G++  L F 
Sbjct: 64  VTLRIAFFSSLVATVLGTMAALALTRYGRFGGRTLFSGMIYAPLVMPEVITGLSLLLLFV 123

Query: 132 PLGMGNSFTSLILVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGASPLLAFRRVTLPL 191
            +     F +++L H    + FV + V + L  F+  L  AA  LG  P   F ++TLPL
Sbjct: 124 AVNFDRGFWTVLLAHITFTMCFVAVVVQSRLVTFDRTLEEAALDLGCPPFQTFFKITLPL 183

Query: 192 IAPGVISGALFAFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIAF 251
           I P V+SG + AF  S D++V+  F  GP   TLP +++S +R  ++P I A  T+LIA 
Sbjct: 184 ILPAVVSGFMLAFTLSLDDLVIASFTTGPGATTLPMRIYSQVRLGVTPEINAVCTILIAI 243

Query: 252 SVLLLLTLEWLRGRSEKLR 270
             ++++    +  R+E  R
Sbjct: 244 VTVVVIVASIVTKRAENQR 262