Pairwise Alignments

Query, 275 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 294 a.a., spermidine/putrescine ABC transporter permease from Pseudomonas simiae WCS417

 Score =  146 bits (369), Expect = 4e-40
 Identities = 90/264 (34%), Positives = 146/264 (55%), Gaps = 11/264 (4%)

Query: 9   VERVWFYSLRILCGLILLFLILPVLVIVPLSFNSGSFLVYPLQGFSLQWYQDFFGSAEWM 68
           ++R  F S  ++ GL  LF+ LP+L++V  SFN  S LV    G+S++WY     + + M
Sbjct: 1   MKRFSFSSFMLVAGL--LFIYLPMLILVIYSFNE-SKLVTVWGGWSIKWYVGLLDNTQLM 57

Query: 69  RALKNSIIVAPAATVLAMVFGTLAAIGLTR-GDFPGKSLVMALVISPMVVPVVIIGVASY 127
            ++  S+ +A    V A+  GTLAA  LTR   F G++L   LV +P+V+P VI G++  
Sbjct: 58  GSVARSLEIACYTAVAAVALGTLAAFVLTRISQFKGRTLFGGLVTAPLVMPEVITGLSLL 117

Query: 128 LFFAPLGM------GNSFTSLILVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGASPL 181
           L F  +             ++ + H      +V + VSA L+  + ++  AA  LGA P 
Sbjct: 118 LLFVAMAQMIGWPQERGIVTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGARPW 177

Query: 182 LAFRRVTLPLIAPGVISGALFAFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTI 241
             F  +T+P+IAP + +G + +FA S D++V+  F++GP   TLP ++FS +R  + P I
Sbjct: 178 KVFFLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEI 237

Query: 242 AAAATLLIAFSVLLLLTLEWLRGR 265
            A A+L++  +V L+  L W   R
Sbjct: 238 NAVASLIL-LAVSLVTFLVWFFSR 260