Pairwise Alignments

Query, 275 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 259 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  148 bits (373), Expect = 1e-40
 Identities = 92/257 (35%), Positives = 142/257 (55%), Gaps = 4/257 (1%)

Query: 11  RVWFYSLRILCGLILLFLILPVLVIVPLSFNSGSFLVYPLQGFSLQWYQDFFGSAEWMRA 70
           R  F  L +L  L++ FLI P L+IV  SF++G  L +P QGFSL+W    F    +  +
Sbjct: 3   RQLFIPLTLL--LVVGFLIGPFLIIVAASFSAGDTLAFPPQGFSLKWIAKVFTVESFRES 60

Query: 71  LKNSIIVAPAATVLAMVFGTLAAIGLTRGDFPGKSLVMALVISPMVVPVVIIGVASYLFF 130
              S+ +A   T  A++ G  A+  ++R   P    V  +V +P++VP +I+G+A   +F
Sbjct: 61  FAMSMFLAIGGTFTALILGIPASYAMSRYKLPFAETVRTIVSAPIIVPGIIVGLALLRYF 120

Query: 131 A-PLGMGNSFTSLILVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGASPLLAFRRVTL 189
             P G+G +  +L L H  L +P+ +  VSA+L     ++  AA  LG+S L AF RV L
Sbjct: 121 VVPFGIGITL-ALFLAHTALILPYAVRVVSASLNNLRSDIEEAAVLLGSSRLGAFFRVVL 179

Query: 190 PLIAPGVISGALFAFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLI 249
           P I  G++S  +  F TSF++V V+LFL+GP   TLP  M   +     P++AA ++LL 
Sbjct: 180 PNIRGGILSAFILGFVTSFNQVPVSLFLSGPGVRTLPIDMLGYMEIVFDPSVAALSSLLA 239

Query: 250 AFSVLLLLTLEWLRGRS 266
             S+ ++   E   G S
Sbjct: 240 FLSIGIVFMAERFLGFS 256