Pairwise Alignments

Query, 275 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 270 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  154 bits (388), Expect = 3e-42
 Identities = 86/245 (35%), Positives = 139/245 (56%), Gaps = 2/245 (0%)

Query: 27  FLILPVLVIVPLSFNSGSFLVYPLQGFSLQWYQDFFGSAEWMRALKNSIIVAPAATVLAM 86
           FL +P+++++  SFN+ S LV    GFSLQWY+  + +   M A   ++ V   +  +  
Sbjct: 17  FLYIPIIILIIYSFNA-SKLVTVWGGFSLQWYKSMWSNQGLMDAAWVTLRVGILSATIGT 75

Query: 87  VFGTLAAIGLTR-GDFPGKSLVMALVISPMVVPVVIIGVASYLFFAPLGMGNSFTSLILV 145
           + GTLAA+ LTR   FPG+ L   ++ +P+V+P VI G++  L F  +G+   F ++++ 
Sbjct: 76  ILGTLAALSLTRFARFPGRVLFSGMIYAPLVMPEVITGLSLLLLFVAVGVDRGFWTVVIA 135

Query: 146 HAVLGVPFVIITVSATLQGFNYNLVRAAASLGASPLLAFRRVTLPLIAPGVISGALFAFA 205
           H    + +V I V + L  F+ +L  AA  LG  P+  F R+TLPLI P VI+G + AF 
Sbjct: 136 HTTFTMCYVAIVVQSRLLTFDRSLEEAALDLGCPPVKTFFRITLPLIFPAVIAGWMLAFT 195

Query: 206 TSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIAFSVLLLLTLEWLRGR 265
            S D++V+  F  GP   TLP +++S +R  ++P I A  T+LI    + ++       R
Sbjct: 196 LSLDDLVIASFATGPGATTLPIKIYSQVRLGVTPEINAICTILIGLVTIGVIAASVASKR 255

Query: 266 SEKLR 270
           +E  R
Sbjct: 256 TELQR 260