Pairwise Alignments

Query, 415 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 277 a.a., Spermidine/putrescine import ABC transporter permease protein PotB (TC 3.A.1.11.1) from Variovorax sp. SCN45

 Score =  136 bits (343), Expect = 7e-37
 Identities = 77/209 (36%), Positives = 112/209 (53%)

Query: 193 YLDIFVRTLWMGVVITTICLVLAYPLAYLLANLPTRQSNLLMILVLLPFWTSILVRVAAW 252
           + ++   TL +  V T I L++  P  Y LA +P R    L +  +LP     +VR A W
Sbjct: 55  FREVLSTTLQVAAVTTLIALLVGLPAGYTLARMPRRWKMWLTLATILPLMVGNVVRSAGW 114

Query: 253 IVLLQSGGLINSALMAMGIIDQPLELVFNRTGVYISMVHILLPFMILPLYSVMKGISPSY 312
           + LL + GL N+     G++ +P++L+FNR  V   MV I+LP M++ L SV++GI  + 
Sbjct: 115 LALLGNSGLFNAVAQWSGLVREPMQLMFNRPAVVGVMVTIVLPLMVMTLASVIEGIPRNV 174

Query: 313 MRAAISLGCHPFASFWRVYFPQTYAGVGAGCLLVFILAIGYYITPALLGSPNDQMVSYFV 372
             AA +LG  PF  F RV  PQ   GV AG  LVFIL +  Y TP L+G P  +M++  +
Sbjct: 175 EEAAANLGARPFTVFRRVVLPQAMPGVIAGMSLVFILCMNAYATPVLIGGPRFRMMTPEI 234

Query: 373 AFYTNTSINWGMATALGGLLLLATVLLYL 401
                   NW    AL  +LL  T+ + L
Sbjct: 235 YQQFVGLNNWPFGAALAFMLLAVTLAVVL 263