Pairwise Alignments

Query, 344 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

Subject, 364 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 66.6 bits (161), Expect = 9e-16
 Identities = 80/329 (24%), Positives = 141/329 (42%), Gaps = 38/329 (11%)

Query: 8   TALALGLF--TAGQAMAADLTVISFGGANKAAQVKAFYEPWEKAGNGKIVAGEYNGEMAK 65
           T LAL L    AG A A D  +  +  ++  A        +EK    K+V   ++     
Sbjct: 7   TLLALSLMGAMAGAAQADDKVLHVYNWSDYIAPDTI--ANFEKESGIKVVYDVFDSNETL 64

Query: 66  VKAMVDTKSVSWNLVEVESPELARGCDEGMFEELDPALFGNEADYVPGAIQPCGVGF--- 122
              ++  KS  +++V   +  LA+    G+++ELD +   N  +     ++   V     
Sbjct: 65  EAKLLAGKS-GYDIVVPSNNFLAKQIKAGVYQELDKSKLSNYDNLNKSLLKAVSVSDPDN 123

Query: 123 -----FVWSTV-MAYNADKLKTA-PTSWADFWDTKQFPGKRGLRKGAKYT--------ME 167
                ++W ++ + YN +K+K A      D WD    P      K    +        + 
Sbjct: 124 KHAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVLLKPENIAKLKSCGVSFLDSPTEMLP 183

Query: 168 FALMADGVAPKDVYKVLATKEGQDRAFKKLDELKPSIQWWEAGAQPPQFLASGDVVMSSA 227
            AL   G+ P D  K    K+ +D   K    ++PSI ++ +       LA+G++ ++  
Sbjct: 184 VALHYLGL-PTDTQKKADLKQAEDLFLK----IRPSIGYFHSSKYISD-LANGNICVAVG 237

Query: 228 YNGRIA-----AVQKESNLKVVWN----GGIYDFDAWAIPKGAKNVEEAKKFIAYSVKPE 278
           Y+G I      A +    +KV ++    G    FD  AIPK A+NV+ A KF+ Y +KP+
Sbjct: 238 YSGDIEQAKSRAAEAGGKVKVAYDIPKEGAGSFFDMVAIPKDAENVDAAYKFMNYLLKPQ 297

Query: 279 QQKIYSENIAYGPANSKAVSLLSDEVKKD 307
                + ++ +   N KA +L+  E+  D
Sbjct: 298 VMAEITNSVHFPNGNEKATALVDKEITSD 326