Pairwise Alignments

Query, 344 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

Subject, 364 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 60.8 bits (146), Expect = 5e-14
 Identities = 73/308 (23%), Positives = 129/308 (41%), Gaps = 53/308 (17%)

Query: 35  KAAQVKAFYEPWE--KAGNGKIVAGEYNGEMAKVKAMVDTKSVSWNLVEVESPELARGCD 92
           KA+ +K  Y+ ++  +   GK++AG                   +++V   +  L +   
Sbjct: 47  KASGIKPVYDVFDSNETLEGKLLAGR----------------TGYDVVVPSNHFLGKQIK 90

Query: 93  EGMFEELDPALFGNEADYVPGAIQPCGVGF--------FVWSTV-MAYNADKLKTAP--- 140
            G F++LD +L  N A+  P  ++              ++W T  + YN DK K      
Sbjct: 91  AGAFQKLDKSLLTNYANLDPALLKRLEKNDPGNQYAVPYLWGTNGIGYNGDKGKEVLGVD 150

Query: 141 --TSWADFWDTKQFPGKRGLRKGAKYTMEFALMADGVAPKDV-YKVLATKEGQDRAFKKL 197
              SWA  ++ +       ++K A   + F   AD + P  + Y  L         +KK 
Sbjct: 151 HIDSWAVLFEPEN------MKKLATCGVSFMDSADEMLPAVLNYMGLNPNSTNPDDYKKA 204

Query: 198 DE----LKPSIQWWEAGAQPPQFLASGDVVMSSAYNG-------RIAAVQKESNLK--VV 244
           +E    ++P + ++ +       LA+G++ +++ ++G       R A   K  N+   + 
Sbjct: 205 EEKLLKVRPYVTYFHSSKYISD-LANGNICVAAGFSGDVFQAKARAAEAGKGVNIAYTIP 263

Query: 245 WNGGIYDFDAWAIPKGAKNVEEAKKFIAYSVKPEQQKIYSENIAYGPANSKAVSLLSDEV 304
             GG   FD  AIPK A NV+EA  FI Y ++PE     S+ + Y   N  A  L+   +
Sbjct: 264 KEGGNLWFDVLAIPKDATNVKEAHAFINYLLQPEVIAQVSDYVGYANPNPGADKLMEQSI 323

Query: 305 KKDMPTTP 312
           + D    P
Sbjct: 324 RTDEAVYP 331