Pairwise Alignments

Query, 344 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

Subject, 346 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  598 bits (1541), Expect = e-176
 Identities = 297/346 (85%), Positives = 317/346 (91%), Gaps = 3/346 (0%)

Query: 1   MRKQLKLTALALGLFTAGQAMAA-DLTVISFGGANKAAQVKAFYEPWEKAGNGKIVAGEY 59
           M   LK + LAL L  A QAMA  DLTV+SFGGANKAAQVKAFY PWE AGNGKIVAGEY
Sbjct: 1   MLSSLKYSVLALSLMGATQAMAGPDLTVVSFGGANKAAQVKAFYAPWESAGNGKIVAGEY 60

Query: 60  NGEMAKVKAMVDTKSVSWNLVEVESPELARGCDEGMFEELDPALFGNEADYVPGAIQPCG 119
           NGEMAKVKAMVDTKSVSW+LVEVESPEL+RGCDE MFE LDP LFGN ADYV GAIQPCG
Sbjct: 61  NGEMAKVKAMVDTKSVSWDLVEVESPELSRGCDEDMFEPLDPKLFGNTADYVKGAIQPCG 120

Query: 120 VGFFVWSTVMAYNADKLKTAPTSWADFWDTKQFPGKRGLRKGAKYTMEFALMADGVAPKD 179
           VGFFVWSTV+AYNADKL +APTSWADFWDTK+FPGKRGLRKGAKYT+EFALMADGVAPKD
Sbjct: 121 VGFFVWSTVLAYNADKLASAPTSWADFWDTKKFPGKRGLRKGAKYTLEFALMADGVAPKD 180

Query: 180 VYKVLATKEGQDRAFKKLDELKPSIQWWEAGAQPPQFLASGDVVMSSAYNGRIAAVQKES 239
           VYKVLA K+GQDRAFKKLDELKPSIQWWEAGAQPPQ+LASGDVVMSSAYNGRIAAVQKES
Sbjct: 181 VYKVLAGKDGQDRAFKKLDELKPSIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQKES 240

Query: 240 NLKVVWNGGIYDFDAWAIPKG-AKN-VEEAKKFIAYSVKPEQQKIYSENIAYGPANSKAV 297
           NLKVVWNGGIYDFDAWAIPKG AK+  E AKKFIA+SV+P+QQK YSENIAYGPAN++AV
Sbjct: 241 NLKVVWNGGIYDFDAWAIPKGLAKDRAEAAKKFIAFSVQPQQQKTYSENIAYGPANTQAV 300

Query: 298 SLLSDEVKKDMPTTPENIANQVQIDVAFWADNSEQLEQRFNAWAAK 343
            LL+ +V KDMPTTPENIANQVQIDV+FWADN EQLEQRFN+WAAK
Sbjct: 301 PLLAKDVLKDMPTTPENIANQVQIDVSFWADNGEQLEQRFNSWAAK 346