Pairwise Alignments

Query, 344 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

Subject, 344 a.a., ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 77/310 (24%), Positives = 127/310 (40%), Gaps = 21/310 (6%)

Query: 9   ALALGLFTAGQAMAADLTVISFGGANKAAQVKAFYEPWEKAGNGKIVAGEYNGEMAKVKA 68
           A AL    A  A A +L V  FGG+            +EK    K+     +        
Sbjct: 14  AAALLAGAASAAQAEELVVGIFGGSFAEDSKTCHIASFEKKTGAKVALKLGSSSQFAASI 73

Query: 69  MVDTKSVSWNLVEVESPELARGCDEGMFEELDPALFGNEADYVPGAIQPCG--VGFFVWS 126
                   +++V +++   ++  +E + E +D +   N A+  P A+   G  V F   +
Sbjct: 74  RATGGKSDFDVVYIDNSLASQLKNEKLLETIDKSKLANAAEVSPRALDKDGQYVVFMTGA 133

Query: 127 TVMAYNADKLKTAPTSWADF----WDTKQFPGKRGLRKGAKYTMEFALMADGVAPKDVYK 182
           TV+ Y+  ++KT PTSWAD     +D +   G      G+++ M    M  G        
Sbjct: 134 TVIVYDTKQIKTPPTSWADLAKPEYDGRLAIGDISGTSGSQFLMALNRMKGG-------- 185

Query: 183 VLATKEGQDRAFKKLDELKPSIQWWEAGAQPPQFLASGDVVMSSAYNGRI-AAVQKESNL 241
            LA  +    A K +   K S+  +    Q        ++  +  Y  R  +A+ K   L
Sbjct: 186 TLANMDAGFAAIKPI--AKSSVTLYTQADQIVSLFERQEIAAAVWYPDRAGSAIDKGLPL 243

Query: 242 KVVW--NGGIYDFDAWAIPKGAKNVEEAKKFIAYSVKPEQQKIYSENIAYGPANSKAVSL 299
            +V+   G +    A  IPKGAK+   A K+I   +  E Q  ++E    GP N++    
Sbjct: 244 AIVYPKEGAVGILPALVIPKGAKSPALALKYIDEVLSKEGQTCFAERKYAGPVNTQV--K 301

Query: 300 LSDEVKKDMP 309
           LSD+  K +P
Sbjct: 302 LSDKAAKIVP 311