Pairwise Alignments

Query, 344 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

Subject, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 38/225 (16%)

Query: 96  FEELDPALFGNEADYVPGAIQPCGVGFFVWSTVMAYNADKLKTAP-----TSWADFWDTK 150
           ++ LDP L        PG      V +   +  + YN DK+K A       SWA  ++ +
Sbjct: 103 WQHLDPKLLKQLEQNDPG--NQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPE 160

Query: 151 QFPGKRGLRKGAKYTMEFALMADGVAPKDVYKVLATKEGQD----------RAFKKLDEL 200
                + L++     M+        +P +++  +    G D          +A  +L EL
Sbjct: 161 NL---KKLKQCGVAFMD--------SPDELFPAVLNYLGMDPRSEKPGDYAKAEARLLEL 209

Query: 201 KPSIQWWEAGAQPPQFLASGDVVMSSAYNGRI-----AAVQKESNLKVVWN----GGIYD 251
           +P I ++ +       LA+GDV ++  Y+G +      AV+ ++ +KV ++    G    
Sbjct: 210 RPYITYFHSSKYVSD-LANGDVCIAFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLW 268

Query: 252 FDAWAIPKGAKNVEEAKKFIAYSVKPEQQKIYSENIAYGPANSKA 296
           FD  AIPK A N E+A  FI Y + P+     S  + Y  AN  A
Sbjct: 269 FDLLAIPKDANNPEQALAFINYLLDPKVIAKVSATVGYANANPDA 313