Pairwise Alignments

Query, 344 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

Subject, 360 a.a., ABC transporter substrate binding protein (mannopine) from Agrobacterium fabrum C58

 Score =  127 bits (320), Expect = 3e-34
 Identities = 102/341 (29%), Positives = 166/341 (48%), Gaps = 20/341 (5%)

Query: 11  ALGLFTAGQAMAADLTVISFGGANKAAQVKAFYEPWEKAGNGKIV--AGEYNGEMAKVKA 68
           ALGL  A       + + + GG  + A  +A++EP+ KA   K+V  +G    + AKV A
Sbjct: 27  ALGLEKASAEQR--VVIATTGGTYEKALREAWFEPFTKATGIKVVTVSGTDAEKRAKVTA 84

Query: 69  MVDTKSVSWNLVEVESPELARGCDEGMFEELDPAL--FGNEADYVPGAIQPCGVGFFVWS 126
           MV T +V+W+L      +        + E+L      F N  D +  +    G      S
Sbjct: 85  MVQTGNVTWDLYLDGEIQAGSDAHFAITEDLSDFCMQFINSTDLLADSCTRGGAKLQSTS 144

Query: 127 TVMAYNADKLKTAPTSWADFWDTKQFPGKRGLRK--GAKYTMEFALMADGVAPKDVYKVL 184
           T++AY  ++  + P +WAD WD  +FPG R           +  AL+ADGV  + ++ + 
Sbjct: 145 TLLAYKLNENGSNPQTWADMWDLAKFPGARSFPNFDDPWRVLAAALLADGVPREKLFPL- 203

Query: 185 ATKEGQDRAFKKLDELKPSIQ-WWEAGAQPPQFLASGDVVMSSAYNGRIAAVQKESNLKV 243
                 DRAF+KLDEL+ S+Q WW  G Q  Q   + +  +   +  R  A++ E   K+
Sbjct: 204 ----DVDRAFRKLDELRDSVQVWWRTGDQSVQAFRNDEYRVGQIWLTRAKALKAE-GYKI 258

Query: 244 VW--NGGIYDFDAWAIPKGAKNVEEAKKFIAYSVK-PEQQKIYSENIAYGPANSKAVSLL 300
            W  +G     D  A+ +GA N E A K I + ++ P  Q    E ++  P + KA+S +
Sbjct: 259 GWSYDGAFLVGDRIALVRGAPNRENALKLIEFWLRNPAAQAKACETLSCTPPSQKAISQM 318

Query: 301 SDEVKKDMPTTPENIANQVQIDVAFWAD-NSEQLEQRFNAW 340
           S E +  +P+  + + N++ +  A W + N   L QR+N+W
Sbjct: 319 SSEARATLPSAAD-VENRIIVPDAQWINANMGMLVQRWNSW 358