Pairwise Alignments

Query, 344 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

Subject, 336 a.a., polyamine ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  192 bits (487), Expect = 1e-53
 Identities = 116/345 (33%), Positives = 180/345 (52%), Gaps = 11/345 (3%)

Query: 1   MRKQLKLTALALGLFTAGQAMAADLTVISFGGANKAAQVKAFYEPWEKAGNGKIVAGEYN 60
           MR +L L+  A        A A DL   S+GG  + AQ  A+ E +     G  V  +  
Sbjct: 1   MRSKLVLSTCAALFALGAAAQANDLVFSSWGGTTQDAQKAAWAEKF-MVETGINVLQDGP 59

Query: 61  GEMAKVKAMVDTKSVSWNLVEVESPELARGCDEGMFEELDPALFGNEADYVPGAIQPCGV 120
            +  K+KAMV+   V+W++V+VE    A+   +G+ E+LD ++  ++    P  +    V
Sbjct: 60  TDYGKLKAMVEANGVTWDVVDVEGDYAAQAGPKGLLEKLDFSVI-DKTKLDPRFVTDYSV 118

Query: 121 GFFVWSTVMAYNADKLKTAPTSWADFWDTKQFPGKRGLRK-GAKYTMEFALMADGVAPKD 179
           G F +S V+  N D +   P SWAD +DT +FPGKR   K  A   +E AL+ADGV    
Sbjct: 119 GSFYYSFVIGCNVDSVSACPKSWADLFDTAKFPGKRTFYKWSAPGVIEAALLADGVTADK 178

Query: 180 VYKVLATKEGQDRAFKKLDELKPSIQWWEAGAQPPQFLASGDVVMSSAYNGRIAAVQKES 239
           +Y +       DRAFKKLD +K  I WW  GAQ  Q +AS +    S +NGR+ A+++  
Sbjct: 179 LYPL-----DLDRAFKKLDTIKSDIIWWSGGAQSQQLIASAEAPFGSVWNGRMTALEQSG 233

Query: 240 -NLKVVWNGGIYDFDAWAIPKGAKNVEEAKKFIAYSVKPEQQKIYSENIAYGPANSKAVS 298
             ++  W   I   D+  +PKG KN + A KFIA +   + Q   +    Y P N ++  
Sbjct: 234 VKVETSWAQNITAADSLVVPKGTKNKDAAMKFIALATSAQAQADMATATGYAPVNIESAK 293

Query: 299 LLSDEVKKDMPTTPENIANQVQIDVAFWADNSEQLEQRFNAWAAK 343
           L+  ++ K +P   +   +QV  D+ +WA + +++ +R+ AW AK
Sbjct: 294 LMDPKIAKSLP--DQQTESQVNADMNYWAQHRDEIGERWYAWQAK 336