Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator UhpA from Pseudomonas putida KT2440

Subject, 211 a.a., Two-component transcriptional response regulator, NarL/FixJ family from Variovorax sp. SCN45

 Score =  135 bits (339), Expect = 7e-37
 Identities = 68/205 (33%), Positives = 121/205 (59%), Gaps = 6/205 (2%)

Query: 2   IRVLVAEDHTIVREGIKQLIGLAKDMQVAGEAGNGEQLLETLRHTPCEVVLLDISMPGVN 61
           IR+ + +DH +VR+G++  +G   ++++ GEAG+  + L  +     +++L+D+ M  +N
Sbjct: 6   IRLFLVDDHPLVRDGLRARLGSMPNLEIVGEAGSAAEALAQIDSVRPDLMLMDVGMKDMN 65

Query: 62  GLEAIPRIRALHDAPAILMLSMHDEAQMAARALKAGAAGYATKDSDPALLLTAIRRVAGG 121
           G+E    +     AP I+MLSM+D  +   +AL+AGA GY  KD+  A ++ AI  V+ G
Sbjct: 66  GIELAALLLQRQGAPHIVMLSMYDNPEYVQKALQAGARGYVLKDAPAAEIVAAIEAVSAG 125

Query: 122 GRYIDPSLADRMVFEVGLTESRPLHTLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS 181
           G ++ P+++ ++       E RP   LL+ RE  +   L +G +   IA+ L LS +T+ 
Sbjct: 126 GTFLSPAVSKKL---FRTQEPRP---LLTPRESEILSALGRGESSKQIARDLGLSVRTVE 179

Query: 182 THKARLMQKLKVNSLAELVKYAMEH 206
            H+  + ++L +   AEL+KYA+EH
Sbjct: 180 AHRQSIKRRLGIEGQAELIKYAVEH 204