Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator UhpA from Pseudomonas putida KT2440

Subject, 219 a.a., DNA-binding response regulator, LuxR family from Pseudomonas putida KT2440

 Score =  135 bits (340), Expect = 6e-37
 Identities = 72/213 (33%), Positives = 127/213 (59%), Gaps = 7/213 (3%)

Query: 3   RVLVAEDHTIVREGIKQLIGLAKDMQVAGEAGNGEQLLETLRHTPCEVVLLDISMPGVNG 62
           R+L+ +DH+++R G++ L+       V GEA +G QLL+ +R    +++LLDISM   +G
Sbjct: 4   RLLLVDDHSLIRAGVRALVCDIPGYDVVGEADDGNQLLDQVRTLAPDIILLDISMRSTSG 63

Query: 63  LEAIPRIRALHDAPAILMLSMHDEAQMAARALKAGAAGYATKDSDPALLLTAIRRVAGGG 122
           L+A+ ++RA      +L+LSMH +  +  RAL++GA GY  KD+    L  A+  V  G 
Sbjct: 64  LDALTQLRASGSTCKVLILSMHTDPDLIMRALESGAHGYLLKDTSATELEQALGAVRHGE 123

Query: 123 RYIDPSLADRMVFEV------GLTESRPLHTLLSEREFSVFERLAQGANVNDIAQQLALS 176
           RY+ P++A  ++ +       G   +   H L S R+  +   + +G +  +IA  L LS
Sbjct: 124 RYLSPAIAHTVINQALRHTKQGKPSAGERHNLTS-RQLEILRLIVRGKSTREIAAGLGLS 182

Query: 177 SKTISTHKARLMQKLKVNSLAELVKYAMEHKLI 209
            KT+ TH++++M++L+++ +A LV +A+  K+I
Sbjct: 183 IKTVETHRSQIMKRLQIHDVAGLVLFAVREKII 215