Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator UhpA from Pseudomonas putida KT2440

Subject, 218 a.a., excinuclease ABC subunit UvrC from Escherichia coli ECRC100

 Score =  142 bits (358), Expect = 5e-39
 Identities = 77/209 (36%), Positives = 127/209 (60%), Gaps = 1/209 (0%)

Query: 1   MIRVLVAEDHTIVREGIKQLIGLAKDMQVAGEAGNGEQLLETLRHTPCEVVLLDISMPGV 60
           +I VL+ +DH +VR GI++++   K ++V GEA  GE  ++  R    +VVL+D+SMPG+
Sbjct: 1   LINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRANAVDVVLMDMSMPGI 60

Query: 61  NGLEAIPRIRALHDAPAILMLSMHDEAQMAARALKAGAAGYATKDSDPALLLTAIRRVAG 120
            GLEA  +I        I+ML++H E  + A+ ++AGAAGY +K + P  +++AIR V  
Sbjct: 61  GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120

Query: 121 GGRYIDPSLADRMVF-EVGLTESRPLHTLLSEREFSVFERLAQGANVNDIAQQLALSSKT 179
           G RYI   +A +M   ++   ++      LSERE  +   + +G  VN+I++QL LS KT
Sbjct: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180

Query: 180 ISTHKARLMQKLKVNSLAELVKYAMEHKL 208
           +++++ R+  KL ++   EL   A+ H L
Sbjct: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209