Pairwise Alignments

Query, 795 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

Subject, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score = 98.2 bits (243), Expect = 2e-24
 Identities = 158/689 (22%), Positives = 273/689 (39%), Gaps = 95/689 (13%)

Query: 13  LWLPLIAWAKPEALPSVVLEPDQQQWLDTHRSLRVGLVLQAPYAQFDRRLQQLYGANVEL 72
           L L LI W       ++ L  ++  WL  H  L++G+    P  +F  +  +  G   + 
Sbjct: 8   LLLILILWNTTAG--ALTLTDEENAWLAAHPQLKLGVDASWPPFEFRDQEGRYQGLAADY 65

Query: 73  VNSLAQTLRLDLTWRNFTDQGSLEHALQSGE--IDFAPGLTQTPASLRLWLFSDPYMRVP 130
           +  + Q  RL +T++        E   Q+ E  ID  PG+  TP       F+ PY+  P
Sbjct: 66  IAMIQQ--RLGVTFKPVEPSSWTEVLAQARESRIDLLPGIMSTPERQGFLAFTRPYLDFP 123

Query: 131 QLVVGPRTGAMAVELEKLEAEQRVAVRMPSPLADYLRGNYGNLNLQGVPDDREALQLVVG 190
            +++  + GA   +L  L   +   V   +P  + LR ++ +LNL  +P+    LQ +  
Sbjct: 124 IVILAHKGGAQPRKLADLYGLKIAVVENYAP-HELLRTHHPDLNLVALPNVSSTLQALAT 182

Query: 191 GQASFAVLDEAQLSRLSRESEFGELAVVGDIGLPQLLRIGSRRDWPMLADVLERGLQAVP 250
            Q    V D A      R+ +   L V G+      L +   RD  +L  +L++ +  + 
Sbjct: 183 DQVDAVVGDLASSIWSLRQLKLDGLYVSGETPYRYQLAMAVPRDKSVLVGILDKVMADMS 242

Query: 251 AKELEQLHQRWLQPKYPRLSESPGFWQNMALLFG----LLLLCALATLVWQRRQQRQLER 306
           + E+ Q+ Q W+      + +   FW ++ L++G    LLL+  LA ++   R  R+L  
Sbjct: 243 SSEISQIQQHWV----GNVVDQRMFWSDL-LVYGLPTVLLLMAVLAVVI---RINRRLS- 293

Query: 307 SLLAARESLVERQVREEALRLSQFAIDQSTVGILWVNWDSHVR-----YANHAAERMLGY 361
                   +  R   E+ LR S++        +  + W++        Y +  AE +LGY
Sbjct: 294 ------SEISRRIALEQELRSSEYHYRGLVESLSAIAWEADANDFTYSYVSPHAEDLLGY 347

Query: 362 SEGALLE----RPLSDFEPSLNMDRWLELWKGARTGAGGVGQFETQCRRADQSLLPVELS 417
                L     R +   E +L    W + +  + T AG     + +  RAD   L V   
Sbjct: 348 PLSDWLRPGFWRSILHPEDAL----WAQAYCDSETAAGRDHSLDYRVIRADGQPLWVRNI 403

Query: 418 LSFLRFRDSEYLVVYLADVTERHRALAALRESEARLKGIAGNVPGLVFRLERDPAEGDLE 477
           +S +       +   + D++E  R   ALR SE +   +    P ++             
Sbjct: 404 VSMIEHGHQPVMRGLMIDISETKRTEDALRLSEQKFASVFQQCPDILLIARH-------- 455

Query: 478 FPYISEGSEALVGYAPSEIQHPQMGLRNLVHPEDRADYHRVQDLALASDQDWSWQGR--- 534
               S+G    V  A  E    Q+GL     P D+       DL L     W  +G    
Sbjct: 456 ----SDGCLLEVNEAFEE----QIGL-----PPDQVIGRTATDLDL-----WGVEGSGPL 497

Query: 535 ILTRQGEQRWADIKASARHLGNGQVVWDGVVWDIT---QGKRAELALAKSQEQLRELSAH 591
           +L R  +    +++ S R   NGQ ++ G+    T    G  A +   +   QL+E    
Sbjct: 498 LLERLHQGGIRNLEMSFRR-SNGQ-LFTGLTSAETFELDGTPALVVAVRDISQLKETQQQ 555

Query: 592 LESVREEEKARIAREVHDELGQML-------TVLKLEVSMCELAYAELDPGLNDR----- 639
           L++  E    + A+  H     +L        +L++    C L   +L+P ++       
Sbjct: 556 LQTSEE----KFAKAFHASPDGLLLSRQSDGLLLEVNEGFCRLTGYDLNPTIDQTSLDLG 611

Query: 640 ----LASMKRLIAQLFQ--LVRDVATALR 662
               L   KRL+ QL +   VRD    +R
Sbjct: 612 IWVDLNERKRLVDQLNRDGFVRDFTCHIR 640



 Score = 43.5 bits (101), Expect = 7e-08
 Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 5/142 (3%)

Query: 308 LLAARESLVERQVREEALRLSQFAIDQSTVGILWVNWDSHVRYANHAAERMLGYSE-GAL 366
           +L     + ER + +E L+L+    + +  G+L  + D  +   N A   + GYSE  AL
Sbjct: 664 MLTIARDITERHLMQEKLQLAATVFENTAEGVLITDIDQRISAVNRAFSEITGYSEIEAL 723

Query: 367 LERPLSDFEPSLNMDRWLELWKGARTGAGGVGQFETQCRRADQSLLPVELSLSFLRFRDS 426
            + P        +   +L +W   +  A G  Q E   +R +  L P  L++S +R  D 
Sbjct: 724 GQTPRLLASGQHDSAFYLAMWH--QLTAEGHWQGEIYNKRKNGELYPSWLTISAVRNSDR 781

Query: 427 E--YLVVYLADVTERHRALAAL 446
           E  + V   AD++    A A L
Sbjct: 782 EITHFVAVFADISSIKHAQAKL 803



 Score = 28.5 bits (62), Expect = 0.002
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 11/89 (12%)

Query: 357 RMLGYSEGALLERPLSDFEPSLNMDRWLELWKGAR-----TGAGGVGQFETQCRRADQSL 411
           R+ GY     ++      + SL++  W++L +  R        G V  F    RR+D  +
Sbjct: 593 RLTGYDLNPTID------QTSLDLGIWVDLNERKRLVDQLNRDGFVRDFTCHIRRSDGQI 646

Query: 412 LPVELSLSFLRFRDSEYLVVYLADVTERH 440
              ELS   L     + ++    D+TERH
Sbjct: 647 RLCELSARPLPITGVDCMLTIARDITERH 675