Pairwise Alignments

Query, 795 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

Subject, 603 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  118 bits (296), Expect = 8e-31
 Identities = 137/521 (26%), Positives = 233/521 (44%), Gaps = 44/521 (8%)

Query: 300 QQRQLERSLL-AARESLVERQVREEALRLSQFAIDQST-----------VGILWVNWDSH 347
           ++ Q E  LL   R   +E +++ E LR  Q  +++S            VG + +    H
Sbjct: 91  RRNQGESDLLHELRVHQIELEMQNEELRRVQLELEESRDRYIDLYEFAPVGYVTLGSSGH 150

Query: 348 VRYANHAAERMLGYSEGALLERPLSDFEPSLNMDRWLELWKGARTGAGGVGQF-ETQCRR 406
           +  AN     MLG+   ALL+   S     ++ D W               +  + + RR
Sbjct: 151 IESANLTLSSMLGFERSALLKLRFSALVSEVSGDDWHRFMAAILNDQEDPHRTTDLRLRR 210

Query: 407 ADQSLLPVELSLSFLRFRDSEY---LVVYLADVTERHRALAALRESEARLKGIAGNVPGL 463
            D+    +E  L  LR  ++ +   + V + D+T   +   AL+ SE R   +A +    
Sbjct: 211 RDEGT--IEARLDCLRVTNAVHGAMVRVAITDITRIKQTEIALQASEKRYSLLAAST--- 265

Query: 464 VFRLERDPAEGDLEFPYISEGSEALVGYAPSE-IQHPQMGLRNLVHPEDRADYHRVQDLA 522
            F      A+G +    ++E    ++G+  +E I  P   +  L+  EDR    RV D  
Sbjct: 266 -FEGIAISAKGRIVD--VNEQLVEMLGFPRAELIGRP---VAELISDEDR---DRVMDNI 316

Query: 523 LASDQDWSWQGRILTRQGEQRWADIKASARHLGN-GQVVWDGVVWDITQGKRAELA--LA 579
               +     G +  R G +   +++A  +   + G+      + DIT  K  E A  +A
Sbjct: 317 HRGHESHIEHGMV-RRDGSR--IEVEAHGQPFSDDGRAFRLTALRDITARKEDEAAARIA 373

Query: 580 KSQEQLRELSAHLESVREEEKARIAREVHDELGQMLTVLKLEVSMCELAYAELDPGLNDR 639
              E LR L+       E E+  IA+++HD LGQ L + + ++     A  +  P     
Sbjct: 374 LHMEHLRNLAIEATLSEERERHSIAKDLHDGLGQTLHLARFKLDRLVKALPQELPTATLA 433

Query: 640 LASMKRLIAQLFQLVRDVATALRPPIL-DAGIASAIEWQARRFEARTQIPCLVQVPDNLP 698
           L  +  L+++    VR + + L PP L D G+ +AI W A     R  +  +V+  D +P
Sbjct: 434 L-ELIGLLSEASGEVRSLTSKLSPPALKDLGLVAAISWLADEMGRRRGLQVVVE-DDGVP 491

Query: 699 -ALSDAKATGLFRILQEALTNVMRHAQAHSVEIELVREGGQLRMTVSDDGQGFCREQT-- 755
             L++ ++T LFR ++E + N+ +HA   S  I L     +L +TV+D G GF   +   
Sbjct: 492 KPLTEGQSTLLFRAVRELVINIAKHAGVGSARIGLRVCNNRLIITVADKGVGFIDWRATL 551

Query: 756 -RPTSFGLVGVRERVLMLGGSMTLESEPGEGTSLSVAIPLE 795
                FGL  VRER+  L G M +++ PGEGT++ + +P +
Sbjct: 552 EARRGFGLSSVRERITFLKGVMDIQTRPGEGTTVVLEMPFD 592