Pairwise Alignments

Query, 940 a.a., LPS-assembly protein LptD from Pseudomonas putida KT2440

Subject, 791 a.a., LPS assembly protein LptD from Dickeya dianthicola ME23

 Score =  302 bits (774), Expect = 5e-86
 Identities = 242/842 (28%), Positives = 375/842 (44%), Gaps = 103/842 (12%)

Query: 119 LAETGPYCGGAYIEPTRPGMADTTPKDESPTYINAKVSKYQQEQQIATLAGDVVMRQGSM 178
           LA+    C        RP +   T  ++ P +I A  S+       A   G+V + QG+ 
Sbjct: 23  LADLASQCMSGVPVYNRPLVTGDT--NQLPVHIKADQSQANYPDS-AVFTGNVNVEQGNR 79

Query: 179 QAEADEANLYQAENRGELK--------GNVKIRDNGSLVVGDEAQIQLDTGEAQVDNAEY 230
              AD+  L Q    G+          GNV   DN  ++ G  A   L+T +  V+N +Y
Sbjct: 80  VLTADQVQLNQKPQPGQTDPIRTVTAIGNVHYDDNQVILKGPRAWSNLNTKDTDVENGDY 139

Query: 231 VMHKSHIRGSALYAKRGENAIIRLKD-GTYTTCEPGSNAWQLKGNNITLNPATGFGTATN 289
           +M     RG A   K+ EN    + D G++T+C PG ++W + G+ +  +         N
Sbjct: 140 LMVGRQGRGDADKMKQRENNRYTILDNGSFTSCLPGDDSWSVVGSEVIQDRQEEVAEIWN 199

Query: 290 VTLRVKDFPVFYTPYIYFPIDDRRQSGFLPPSFSTSSDTGFMLVTPYYFNLAPNYDATLY 349
               +   PVFY+PY+  PI D+R+SGFL PS    +  GF LVTPYY+N+APNYDAT+ 
Sbjct: 200 ARFHIAGVPVFYSPYMQMPIGDKRRSGFLIPSAKYGNRNGFELVTPYYWNIAPNYDATIT 259

Query: 350 PRYMAKRGLLMEGEFRYLTPSSEGQFGGAYL------ND---KNDDRKDQTDY----KDQ 396
           P     RG   + EFR+L+     +FG + +      ND   KND    ++ Y       
Sbjct: 260 PHVQTNRGTQWQNEFRHLS-----RFGFSVVEFDWLQNDKQYKNDVLSGKSGYAADENYN 314

Query: 397 RWMVNWQHKGGLDERLMTEVDYTDISDPFYFQDLESDQIGVESRDLLNQQGALTYRGDSY 456
           RW+ +W H G +D+     VDYT +SD  YF DL+S   G  +     Q+ +L Y   ++
Sbjct: 315 RWLFHWMHSGVVDQVWRINVDYTKVSDQNYFTDLDS-VYGNTTDGYATQKFSLGYATRNW 373

Query: 457 TARLNVHAYEM-ATISQITPYDRLPQLTLNGTLPFQPGGLNLGYETEAVRFDRDLKDSAV 515
            A L+   Y++ + ++    Y  +PQL +N          N+G       FD  L   A 
Sbjct: 374 DATLSTRQYQIFSNLANRDVYRAMPQLDINFAQN------NIG------PFDLYLYGQAA 421

Query: 516 FDEDGNPDLTAGLKPDGIGGRRLDENIFGVARANGTRLNVAPSISLPMEASYGYITPKLK 575
              + NP       PD                   TR ++ P++SLP+   +  ++ + K
Sbjct: 422 KFTNVNPTY-----PD------------------ATRFHIEPTLSLPLSNGWASLSTETK 458

Query: 576 YMYTHYDLD-LDSKGKGDIAGANADTLDVFGDYKSNLNRDIPIFSVDSGLYFDRNTSLFG 634
            M THY  + LD+         +A +L      K ++NR +P F  D  L F+R+   + 
Sbjct: 459 LMATHYQQENLDTYRDNHADNTDATSL------KGSVNRVMPQFKTDGKLVFERDMD-WA 511

Query: 635 TNYRQTLEPRMFYLYVPYKDQMDIPLFDTGETLFSYDSLFRDNRFSGTDRIGDENKLSLG 694
             Y QTLEPR  YLYVPY+DQ  I  +D+      Y  LFR+  FSG DRI   N++S G
Sbjct: 512 KGYTQTLEPRAQYLYVPYRDQSSIRAYDSTLLQADYAGLFRERTFSGLDRIASANQVSTG 571

Query: 695 VTTRWIEENGFERQNFSIGQAYYF-KDRKVQLPGIDYRTRKDAQSDVSPYALVYNYYFNR 753
           VTTR  + +  ER N S+GQ YYF + R      ID    + + S    +A    + F  
Sbjct: 572 VTTRLYDSSLEERFNASLGQIYYFERPRTGTASTIDQSDNRGSLS----WAGDSYWKFAD 627

Query: 754 DWRFNSDFNWDPDSRSTRSGSAMFHYQPEDNPNKIVNLGYRYRNDTIAYDSTTGTWKVGG 813
           +W       +D   +    G A+  Y+      +++ L YR+ +            K   
Sbjct: 628 NWGIRGGAQYDQRLKDFTLGDAVLEYR--GGGERMLQLNYRFASS-----------KYIQ 674

Query: 814 GDYGTPGDPNYIKDYYKIQQHDFSVIWPIVPQWNVIARWQHDYNRNRTLEAMGGFEYDNC 873
               T  +P + +    I Q   +  WP+  +W ++  + +D   N+  + + G +Y  C
Sbjct: 675 AMLPTVTNPGFQQG---ISQIGATASWPLTDRWAIVGAYYYDTKANQPADQLLGLQYSTC 731

Query: 874 CWKLRL--INRYWIDYDDFSQALPQNEKGDHGVFLQIVLKGLGGVVGNKVESFLDQGIQG 931
           CW + +    +  I     +Q++  N+ G         L+GL        E  L  GI  
Sbjct: 732 CWAVNVGYERKITIWNSTTNQSVYDNKLG-----FSFELRGLSSNYSLGTEKMLKTGILP 786

Query: 932 YR 933
           Y+
Sbjct: 787 YQ 788