Pairwise Alignments

Query, 439 a.a., peptidyl-prolyl cis-trans isomerase from Pseudomonas putida KT2440

Subject, 623 a.a., putative Peptidyl-prolyl cis-trans isomerase D from Pseudomonas putida KT2440

 Score = 92.8 bits (229), Expect = 3e-23
 Identities = 104/446 (23%), Positives = 184/446 (41%), Gaps = 81/446 (18%)

Query: 4   KLIDRLRPVLLGVALLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRVH-EVQQTIAKRG 62
           K I  L  VL+ +        AA    D   A V+   + Q++L Q    + +Q + + G
Sbjct: 15  KTIIGLIVVLMALTGFEAIFQAATHSQD--AAKVNGQTISQNELSQAADMQRRQLMQQLG 72

Query: 63  GGVPPT----SALEQQVLERLIVENLQLQIGERSGIRITDEELNQAIGTIAQ---RNGMS 115
               P       L ++ L+ LI   L LQ  E +    ++  L+Q I    +       S
Sbjct: 73  KDFDPALLDDKLLREEALKGLISRKLLLQGAEDAKFAFSEAALDQVILQTPEFQVDGKFS 132

Query: 116 LDQFRAALARDGLSFDDAREQVKREMIISRVRQRRVAERIQVSEQEVKNF---------- 165
            ++F   + + G      RE +  EM+I ++R         V++Q+V  F          
Sbjct: 133 AERFDQVIRQMGYGRMQFREMLGEEMLIGQLRTGLAGSSF-VTDQQVDAFARLEKQTRDF 191

Query: 166 ----LASDLGKMQMSEEYRLANILIPTPEAANSDDIQKAARKVGDVYQQLRQGADFGQMA 221
                 +D   +++S+E   A+      E  + D +      V D Y +L++ A F Q+ 
Sbjct: 192 ASLTFKADPAAVKVSDEEVKAHYDQHAKEFMSPDQV------VID-YIELKKSAFFDQVK 244

Query: 222 IANSASENALEGGEMGWRKAGQLPPDFAKMLSSMPVGEITQPIRIPNGFIILKLEEKRGG 281
           + +                  +L   + K +++                           
Sbjct: 245 VTDE-----------------ELKAQYEKEIAN--------------------------- 260

Query: 282 SENVLRDEVHVRHILIKPSEIRSEAATEQLAERLYDRIKNGEDFGELAKSFSEDPGSALN 341
               L ++ H  HILI+ ++  ++A  +  AE +  R+  GEDF  LAK FS+DPGSA  
Sbjct: 261 ----LAEQRHAAHILIEVNDKVTDAQAKARAEEIEQRLAKGEDFAALAKEFSQDPGSANT 316

Query: 342 GGDLNWVDPNSLVPEFREQMANAQQGVVTKPFKTQYGWHVLEVLGRRATDSTEQAREQQA 401
           GGDL +  P    P F E +   Q G V+ P +T++G+H++++LG +A +    A  +  
Sbjct: 317 GGDLGFAGPGVYDPAFEEALYKLQDGQVSAPVRTEFGYHLIKLLGVQAPEVPSFASLKDK 376

Query: 402 LS-VLRNRKYDEELQTWLRQIRDEAY 426
           L+  L+    ++      +Q++D AY
Sbjct: 377 LTRDLKMPLVEQRYVDASKQLQDAAY 402



 Score = 51.2 bits (121), Expect = 9e-11
 Identities = 55/248 (22%), Positives = 117/248 (47%), Gaps = 21/248 (8%)

Query: 85  QLQIGERSGIRITDEELNQAIGTIAQRNGMSLDQFRAALARDGLSFDDAREQVKR----- 139
           QL+ G      +TD++++       Q    +   F+A  A   +S ++ +    +     
Sbjct: 162 QLRTGLAGSSFVTDQQVDAFARLEKQTRDFASLTFKADPAAVKVSDEEVKAHYDQHAKEF 221

Query: 140 ----EMIISRVRQRRVA--ERIQVSEQEVKNFLASDLGKMQMSEEYRLANILIPTPEAAN 193
               +++I  +  ++ A  ++++V+++E+K     ++  +  +E+   A+ILI   +   
Sbjct: 222 MSPDQVVIDYIELKKSAFFDQVKVTDEELKAQYEKEIANL--AEQRHAAHILIEVNDKVT 279

Query: 194 SDDIQKAARKVGDVYQQLRQGADFGQMAIANSASE-NALEGGEMGWRKAGQLPPDFAKML 252
             D Q  AR   ++ Q+L +G DF  +A   S    +A  GG++G+   G   P F + L
Sbjct: 280 --DAQAKAR-AEEIEQRLAKGEDFAALAKEFSQDPGSANTGGDLGFAGPGVYDPAFEEAL 336

Query: 253 SSMPVGEITQPIRIPNGFIILKL---EEKRGGSENVLRDEVHVRHILIKPSEIRSEAATE 309
             +  G+++ P+R   G+ ++KL   +     S   L+D++  R + +   E R   A++
Sbjct: 337 YKLQDGQVSAPVRTEFGYHLIKLLGVQAPEVPSFASLKDKL-TRDLKMPLVEQRYVDASK 395

Query: 310 QLAERLYD 317
           QL +  Y+
Sbjct: 396 QLQDAAYE 403