Pairwise Alignments

Query, 267 a.a., Ribosomal RNA small subunit methyltransferase A from Pseudomonas putida KT2440

Subject, 272 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA from Dickeya dianthicola ME23

 Score =  239 bits (609), Expect = 6e-68
 Identities = 134/262 (51%), Positives = 172/262 (65%), Gaps = 13/262 (4%)

Query: 7   HRARKRFGQNFLHDAGIIDRILRAINAKAGEHLLEIGPGQGALTEGLLGSGAQLD---VV 63
           H ARKRFGQNFL+D  +ID I+ AI+ + G+ ++EIGPG GALT   +  G ++D   VV
Sbjct: 9   HFARKRFGQNFLNDQFVIDSIVSAIHPQPGQAIVEIGPGLGALT---IPVGERIDRFTVV 65

Query: 64  ELDKDLVPILQHKFADRSNFRLHQGDALKFDF----NQLGVPPRSLKVVGNLPYNISTPL 119
           ELD+DL   L+     +    + Q DA+  DF     Q G P   L+V GNLPYNISTPL
Sbjct: 66  ELDRDLAARLEVHPTLKDKLTIIQQDAMTVDFAALSQQAGQP---LRVFGNLPYNISTPL 122

Query: 120 IFHLLSHAGLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFN 179
           +FHL S+   IRDMHFMLQKEVV R+ AGP    +GRLS+M QY+CRV  +  V P AF 
Sbjct: 123 MFHLFSYTLAIRDMHFMLQKEVVNRLVAGPDSKAYGRLSVMAQYYCRVIPVLEVPPTAFK 182

Query: 180 PPPKVDSAIVRLVPHEVLPFPAKDHLLLERVVREAFNQRRKTLRNTMKGLLDSAAIEAAG 239
           P PKVDSA+VRLVPH   P+PA +  +L R+  EAFNQRRKTLRN++  L     + A  
Sbjct: 183 PAPKVDSAVVRLVPHATSPYPAVNTRILGRITTEAFNQRRKTLRNSLGNLFTPEQLTALE 242

Query: 240 VDGSLRPEQLDLAAFVRLADQL 261
           VD ++R E + +A + RLA+ L
Sbjct: 243 VDPNIRAENVTIAQYCRLAEWL 264