Pairwise Alignments
Query, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440
Subject, 1283 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417
Score = 496 bits (1277), Expect = e-144
Identities = 281/718 (39%), Positives = 420/718 (58%), Gaps = 25/718 (3%)
Query: 539 LVVAVRDISQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNEGFCRLTGYD 598
++ +DI+ E + L+ SE+++ + D ++ S S L ++ + GYD
Sbjct: 565 IIGVAKDITDQIEASESLRDSEQRYRMLAESISD-VICSTDSQLALNYISPSVNAVLGYD 623
Query: 599 LN--------PTIDQTSLDLGIWVDLNERKRLVDQLNRDGFVRD------FTCHIRRSDG 644
++ I GI+ + E R + +RD F R+DG
Sbjct: 624 VDWVFKNGWQSIIANPQQLTGIYSLMEEVSRALGDPEALNKLRDEIQTQLFLFDCLRADG 683
Query: 645 QIRLCELSARPLPIT----GVDCMLTIARDITERHLMQEKLQLAATVFENTAEGVLITDI 700
R + R + + + +L + RDI+++ ++ L++AATVFE++ +LITD
Sbjct: 684 --RKVPIELRMVLVWDEHGAFEGILGVGRDISQQRRAEKDLRMAATVFEHSTSAILITDP 741
Query: 701 DQRISAVNRAFSEITGYSEIEALGQTPRLLASGQHDSAFYLAMWHQLTAEGHWQGEIYNK 760
I N AFS ++GY+ + L Q P +L + A + QL W+GE++ K
Sbjct: 742 AGYIVQANEAFSRVSGYAVSDVLDQLPNMLTVDEQQEAHLRYVLKQLHQHSTWEGEVWLK 801
Query: 761 RKNGELYPSWLTISAVRNSDREITHFVAVFADISSIKHAQAKLDYQAHHDPLTGLPNRTL 820
R+NGE YP+W+ I+AV + + ++ +V F+DIS K ++ ++ A++D LT LPNRTL
Sbjct: 802 RRNGEHYPAWVGITAVFDDEGDLASYVCFFSDISERKASEQRIHRLAYYDALTHLPNRTL 861
Query: 821 FENRLQGVLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQVRDVD 880
F++RL L A+ ++FLDLDRFK INDSLGH GD +LK +A RL V + D
Sbjct: 862 FQDRLHTALQAAERQKSWVVLMFLDLDRFKPINDSLGHAAGDRMLKEMATRLLGCVAEDD 921
Query: 881 TVARLGGDEFIILL-PGLHKP---SDASTIANKLLACFNAPFQAGEHEFFTSASIGISLY 936
TVAR+GGDEF +LL P +++ + A +A ++LA PF EFF +ASIGI+L
Sbjct: 922 TVARMGGDEFTLLLQPRVNREMALNRAIHVAEQILASLVKPFVLEGREFFVTASIGIALS 981
Query: 937 PQDGTDVSTLIRNADAAMYRSKAKGRNRVEAYTRDLTAQASERIALEHELRRAVERNEMS 996
PQDG ++S L++NAD AMY +K +G+N + Y D+ A A ER+ LE +LR A+E+NE
Sbjct: 982 PQDGNELSQLMKNADTAMYHAKERGKNNFQFYQADMNASALERLELESDLRHALEQNEFV 1041
Query: 997 LCFQPKLSLKTQSLVGAEALIRWSHPTFGEVPPEHFIHLAEENGTILQLGDWVLEQACRQ 1056
L +QP+ S + L GAEAL+RW HP G VPP FI + EE G ++ +GDWV+ +ACRQ
Sbjct: 1042 LYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEELGLVVDVGDWVISEACRQ 1101
Query: 1057 MQAWKQHYQPFGPLSINLAGAQLRHPHLARRIEQLLKHHQLKAGDLQLEITENFIMSQAE 1116
++ W Q+ +S+N++ Q L RI +LK L L+LE+TE+ +M +
Sbjct: 1102 LKTWHQNKVRVPKVSVNISARQFSDGQLGTRIATILKDTGLPPACLELELTESILMREVN 1161
Query: 1117 EALAVLYQLKKLGVQLAIDDFGTGYSSLSYLKRLPLDILKIDKSFIRGLPDDPHDAAIAR 1176
EA+ +L LK LG+ +A+DDFGTGYSSL+YLK+ P+D+LKID++F+ GLP DA IAR
Sbjct: 1162 EAMQILDSLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPSGEQDAQIAR 1221
Query: 1177 AIIALGRSMQLTIIAEGVENQAQQRFLAAEGCEQIQGYIVSLPLPPEEFAAAFLRIAL 1234
AIIA+ S+ L +IAEGVE Q FL GC+++QGY+ P+P F A F AL
Sbjct: 1222 AIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGRPMPANRFEAQFSNDAL 1279
Score = 80.9 bits (198), Expect = 7e-19
Identities = 78/286 (27%), Positives = 139/286 (48%), Gaps = 30/286 (10%)
Query: 292 LSSEISRRIALEQELRSSEYHYRGLVESLSAIAWEADANDFTYSYVSPHAEDLLGYPLSD 351
++ +I+ +I + LR SE YR L ES+S + D + +Y+SP +LGY + D
Sbjct: 568 VAKDITDQIEASESLRDSEQRYRMLAESISDVICSTD-SQLALNYISPSVNAVLGYDV-D 625
Query: 352 WLRPGFWRSIL-HPEDALWAQAYCDS-ETAAGRDHSLD------------YRVIRADGQ- 396
W+ W+SI+ +P+ + + A G +L+ + +RADG+
Sbjct: 626 WVFKNGWQSIIANPQQLTGIYSLMEEVSRALGDPEALNKLRDEIQTQLFLFDCLRADGRK 685
Query: 397 -PLWVRNIVSMIEHGHQPVMRGLMIDISETKRTEDALRLSEQKFASVFQQCPDILLIARH 455
P+ +R ++ EHG + G+ DIS+ +R E LR++ A+VF+ +LI
Sbjct: 686 VPIELRMVLVWDEHGAFEGILGVGRDISQQRRAEKDLRMA----ATVFEHSTSAILITDP 741
Query: 456 SDGCLLEVNEAFEEQIGLPPDQVIGRTATDLDL-WGVEGSGPLLLERLHQGGIRNLEMSF 514
+ G +++ NEAF G V+ + L + E +L++LHQ E+
Sbjct: 742 A-GYIVQANEAFSRVSGYAVSDVLDQLPNMLTVDEQQEAHLRYVLKQLHQHSTWEGEVWL 800
Query: 515 RRSNGQ---LFTGLTSAETFELDGTPALVVA-VRDISQLKETQQQL 556
+R NG+ + G+T+ F+ +G A V DIS+ K ++Q++
Sbjct: 801 KRRNGEHYPAWVGITA--VFDDEGDLASYVCFFSDISERKASEQRI 844
Score = 45.8 bits (107), Expect = 2e-08
Identities = 70/336 (20%), Positives = 133/336 (39%), Gaps = 30/336 (8%)
Query: 294 SEISRRIALEQELRSSEYHYRGLVESLSAIAWEADANDFTYSYVSPHAEDLLGYPLSDWL 353
S+I+ R +E L E + +V ++ + D + + H LGY ++
Sbjct: 437 SDITSRKLIELSLVERESFWSDVVRTVPDHLYVQDVISQRMIFSNHHLGHTLGYNKAELQ 496
Query: 354 RPG--FWRSILHPEDALWAQAYCDSETAAGRDHSLDYRVIRADGQPLWVRNIV---SMIE 408
+ G FW +LHPEDA + G L ++ W R + ++
Sbjct: 497 QMGEYFWEILLHPEDAEHYHDLRQQQRQIGYTTQLQCQLRFRHRNNQWRRFDIREQALAR 556
Query: 409 HGHQPVMR--GLMIDISETKRTEDALRLSEQKFASVFQQCPDILLIARHSDGCLLEVNEA 466
+ R G+ DI++ ++LR SEQ++ + + D+ + + S L ++ +
Sbjct: 557 DKTTQISRIIGVAKDITDQIEASESLRDSEQRYRMLAESISDV-ICSTDSQLALNYISPS 615
Query: 467 FEEQIGLPPDQVIGR-----TATDLDLWGVEG---------SGPLLLERLHQGGIRNLEM 512
+G D V A L G+ P L +L L +
Sbjct: 616 VNAVLGYDVDWVFKNGWQSIIANPQQLTGIYSLMEEVSRALGDPEALNKLRDEIQTQLFL 675
Query: 513 --SFRRSNGQLFTGLTSAETFELDGTPALVVAV-RDISQLKETQQQLQTSEEKFAKAFHA 569
R ++ L ++ G ++ V RDISQ + ++ L+ + A F
Sbjct: 676 FDCLRADGRKVPIELRMVLVWDEHGAFEGILGVGRDISQQRRAEKDLRMA----ATVFEH 731
Query: 570 SPDGLLLSRQSDGLLLEVNEGFCRLTGYDLNPTIDQ 605
S +L++ + G +++ NE F R++GY ++ +DQ
Sbjct: 732 STSAILITDPA-GYIVQANEAFSRVSGYAVSDVLDQ 766