Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

Subject, 596 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase from Xanthobacter sp. DMC5

 Score =  460 bits (1183), Expect = e-134
 Identities = 266/604 (44%), Positives = 356/604 (58%), Gaps = 33/604 (5%)

Query: 4   YKAPLRDMRFVLNEVFNVAEQWTQLPGLAEVVDADTAMAVLEEAGKVTARTIAPLSRAAD 63
           Y+AP+ ++ + L    ++     Q  GL ++   D   AVL+EAGK     IAP  R AD
Sbjct: 3   YRAPVEEVSYFLKTSTSLPNLMAQ--GLVDL-SFDVVDAVLDEAGKFAGSVIAPFDRVAD 59

Query: 64  EEGCHWDNGAVRTPAGFIEAYNTYAEGGWVGVGGDPLFGGMGMPKAISAQVEEMVNASSL 123
           ++GC   +GAV TP G   AY  ++E GW GV  +  FGG  +P ++++ + E  NA+S 
Sbjct: 60  KQGCTLKDGAVTTPEGMRAAYEAWSEAGWSGVAAEEEFGGQNLPTSVTSALTEFWNAASP 119

Query: 124 AFGLYPMLTAGACLSINAHASEALKEKYLPNMYAGVWAGSMCLTEPHAGTDLGIIRTKAE 183
           AFG+  +LT GA  ++ AH S  L+  +LP + +G W G+M LTEP AG+DL  +R+KA 
Sbjct: 120 AFGICGVLTLGAIEALTAHGSAELQHIFLPKLVSGTWTGTMNLTEPQAGSDLAALRSKAV 179

Query: 184 PQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFLVNEDGS 243
            QADG+Y++ GTKIFIT GEHD+ ENI+HLVLA+LPDAPAG KGISLF+VPKFLVN DGS
Sbjct: 180 KQADGTYRIFGTKIFITYGEHDIAENIVHLVLARLPDAPAGTKGISLFVVPKFLVNADGS 239

Query: 244 LGARNPATCGSIEHKMGIQASATCVMNFDE----AVGYIVGEPNKGLAAMFTMMNYERLG 299
           LGARN A C  IEHK+G+  S TC M F E    A+GY+VGE N+GLA MFTMMN  RL 
Sbjct: 240 LGARNDAVCAGIEHKLGLHGSPTCTMTFGEKGEGAIGYLVGEENRGLACMFTMMNNARLA 299

Query: 300 VGIQGLASAERSYQNAVEYARDRLQSRAPAGPQAKDKAADPIIVHPDVRRMLLTMKALIE 359
           VG+QG+A AER+ Q A  +ARDR Q +AP       + + PII HPDV+RMLLTM+A  +
Sbjct: 300 VGVQGVAVAERATQRAFAFARDRKQGKAPG-----VEGSAPIIAHPDVKRMLLTMRAETD 354

Query: 360 GGRAFSTYVAMQLDSAKYSEDASVRKRSEELVALLTPVAKAFLTDLGLECAVHGQQVFGG 419
             RA     A  LD ++   D   R  +    +LLTPVAKAF +D G+E +  G QV GG
Sbjct: 355 AARALCLKTADALDRSRLLPDPIARAAALAEASLLTPVAKAFSSDAGIEVSSLGIQVHGG 414

Query: 420 HGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGG-------AYYKLFSDEI 472
            GY+ E G  Q +RD RI  IYEGTNGIQA+DL+ RK+   GG       A Y+  ++E+
Sbjct: 415 MGYVEETGAAQHLRDARIFAIYEGTNGIQAIDLVTRKLPQEGGDVVNALIADYRETAEEV 474

Query: 473 RQFITGAGSELDEFAKPLGASLDQLDGLTEWVLQQAKGNPNEIGAASVEYLHAFGYVAYG 532
                    +       L  ++D L   T  +L +    P +  A +  YL  +   A G
Sbjct: 475 SAL---NAPDFGHAGPRLAEAVDALGRATRVMLDRVADEPAKALATATPYLRLYARAAGG 531

Query: 533 YMWALMARAALAGEGDA------PFYSGKLGTARFYFARLLPRVDSLVASVKAGSESLYL 586
              A +AR ALA   +       P  + ++  ARF+   L      L   V  G+    +
Sbjct: 532 ---AFLARTALAAYAERAAGATDPRLAARITVARFFAENLAVEAKGLEEVVNGGAGG--V 586

Query: 587 LDAE 590
           L+AE
Sbjct: 587 LEAE 590