Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

Subject, 600 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

 Score =  374 bits (960), Expect = e-108
 Identities = 233/599 (38%), Positives = 333/599 (55%), Gaps = 22/599 (3%)

Query: 9   RDMRFVLNEVFNVAEQWTQLPGLAEVVDADTAMAVLEEAGKVTARTIAPLSRAADEEGCH 68
           R++ F L EV + AE  TQ    AE  + +T  A +  A  +  +  AP +R  DE    
Sbjct: 9   RNLAFELYEVLD-AEGLTQRERFAEH-NRETFDAAISTARNIAEKYFAPHNRKNDENEPR 66

Query: 69  WDNGAVRTPAGFIEAYNTYAEGGWVGVGGDPLFGGMGMPKAISAQVEEMVNASSLAFGLY 128
           +++G          A + + E G++        GGM +P  +S        +++ A   Y
Sbjct: 67  YEDGKAILIPEVKPAVDAFLEAGFLNAARSFEAGGMQLPTLLSQACFAHFQSANAASTSY 126

Query: 129 PMLTAGACLSINAHASEALKEKYLPNMYAGVWAGSMCLTEPHAGTDLGIIRTKAEPQADG 188
           P LT GA   I +  ++  K ++L  M  G + G+M LTEPHAG+ L  IRT+AEP ADG
Sbjct: 127 PFLTMGAANLIESFGTDDQKRRFLQPMIDGRFFGTMALTEPHAGSSLADIRTRAEPAADG 186

Query: 189 SYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFLVNEDGSLGARN 248
           +Y++ G KIFI+GG+H L+ENI+H+VLAKLPDAPAG KGISLF+VPKFLVN+DGSLG RN
Sbjct: 187 TYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPAGVKGISLFIVPKFLVNDDGSLGERN 246

Query: 249 PATCGSIEHKMGIQASATCVMNFDE---AVGYIVGEPNKGLAAMFTMMNYERLGVGIQGL 305
                 + HKMG + + +  +NF +    VGY+VG+P++GL+ MF MMN  R+GVG+  +
Sbjct: 247 DVLLAGLFHKMGWRGTTSTALNFGDNGHCVGYLVGQPHQGLSCMFQMMNEARIGVGMGAV 306

Query: 306 ASAERSYQNAVEYARDRLQSRAPAGPQAKDKAADP--IIVHPDVRRMLLTMKALIEGGRA 363
                 Y  ++EYAR+R Q R    P +KD A  P  II H D++RMLLT K+ +EG   
Sbjct: 307 MLGYAGYLYSLEYARERPQGRL---PDSKDPATAPVSIIQHADIKRMLLTQKSYVEGAFD 363

Query: 364 FSTYVAMQLDSAKYSEDASVRKRSEELVALLTPVAKAFLTDLGLECAVHGQQVFGGHGYI 423
              Y A   D     E  + RK + EL+ LLTP+ K++ ++  L+      Q+ GGHGY 
Sbjct: 364 LGLYAARLFDDTTTLETEAERKHAHELLDLLTPIVKSWPSEFCLKANELAIQILGGHGYT 423

Query: 424 REWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYYKLFSDEIRQFITGAGSE- 482
           RE+  EQ  RD R+  I+EGT+GIQ+LDL+GRK+  +GGA  K     I +  TGA ++ 
Sbjct: 424 REYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGAGLKQLIRLIAE--TGARAQE 481

Query: 483 ---LDEFAKPLGASLDQLDGLTEWVLQQ-AKGNPNEIGAASVEYLHAFGYVAYGYMWALM 538
              L    +PL   +++L  +T  +L   A G  N   A S  YL  FG+   G+ W   
Sbjct: 482 YPSLTALREPLEQLVNRLQSVTISLLTDLAHGKVNSSLANSALYLKVFGHTVIGWRWLEQ 541

Query: 539 ARAALAG-----EGDAPFYSGKLGTARFYFARLLPRVDSLVASVKAGSESLYLLDAEQF 592
           A  A  G       D  FY GKL  AR++    +P     +A ++A  ++   +  E F
Sbjct: 542 AIRAEEGFAKGNAADVAFYKGKLQAARYFLTWEVPSCHHELALLEARDDTCLGMQDEWF 600