Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

Subject, 593 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

 Score =  446 bits (1147), Expect = e-129
 Identities = 266/599 (44%), Positives = 345/599 (57%), Gaps = 21/599 (3%)

Query: 4   YKAPLRDMRFVLNEVFNVAEQWTQLPGLAEVVDADTAMAVLEEAGKVTARTIAPLSRAAD 63
           Y APLR+M F + EV  +     Q     E    D   A+L+EA    A  + PL+R  D
Sbjct: 4   YIAPLREMLFAMKEVGGLDAICAQPDH--EETTPDLVEAILQEAANYAAGVLDPLNRPGD 61

Query: 64  EEGCHWDNGAVRTPAGFIEAYNTYAEGGWVGVGGDPLFGGMGMPKAISAQVEEMVNASSL 123
            +G  W +G V    GF EA+ ++ E GW G+     +GG G+P  +S  V EM  +S+L
Sbjct: 62  VQGARWHDGRVTPADGFREAWASFCENGWNGMPAATEWGGQGLPTLVSTAVLEMWKSSNL 121

Query: 124 AFGLYPMLTAGACLSINAHASEALKEKYLPNMYAGVWAGSMCLTEPHAGTDLGIIRTKAE 183
           AF L  MLT GA  +I  H S+AL+ ++L  M  G W G+M LTEP AG+DL  +R++A 
Sbjct: 122 AFSLCQMLTLGAVEAIAHHGSDALQRRFLAPMVEGRWTGTMNLTEPQAGSDLAALRSRAV 181

Query: 184 PQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFLVNEDGS 243
            + D  Y VSG KIFIT GEHD+ ENI+HLVLA+LPDAP G KGISLFL PK+LVN+DG+
Sbjct: 182 HEGD-HYHVSGNKIFITWGEHDMAENIVHLVLARLPDAPPGVKGISLFLCPKYLVNDDGT 240

Query: 244 LGARNPATCGSIEHKMGIQASATCVMNFDE---AVGYIVGEPNKGLAAMFTMMNYERLGV 300
           LG RN   C SIEHKMGI  S T  M+F +   A+GY+VGEP++GLA MFTMMN+ RL V
Sbjct: 241 LGERNDLACTSIEHKMGIHGSPTASMSFGDSGGAIGYLVGEPHQGLACMFTMMNHARLNV 300

Query: 301 GIQGLASAERSYQNAVEYARDRLQSRAPAGPQAKDKAADPIIVHPDVRRMLLTMKALIEG 360
           G++G+  +ER+YQ A  YA +R+Q +    P      A  I  HPDVRRML+ MKA  E 
Sbjct: 301 GLEGVGISERAYQRARAYALERVQGK----PLISGSTA--IAGHPDVRRMLMDMKARTEA 354

Query: 361 GRAFSTYVAMQLDSAKYSEDASVRKRSEELVALLTPVAKAFLTDLGLECAVHGQQVFGGH 420
            RA + + A Q+D A    DA  R +++ LV LL PV K + TD        G QV GG 
Sbjct: 355 MRALAYFCAGQMDRAAGHADAQERAQAQALVGLLIPVVKGWCTDSAQGITSDGVQVHGGM 414

Query: 421 GYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYYKLFSDEI----RQFI 476
           GY+ E G  Q +RD RIT IYEGT GIQA DL+GRK+   GG   K     I    R+ +
Sbjct: 415 GYVEETGASQHMRDARITTIYEGTTGIQANDLIGRKLAREGGRTLKALLGRIDGDARRLV 474

Query: 477 TGAGSELDEFAKPLGASLDQLDGLTEWVLQQAKGNPNEIGAASVEYLHAFGYVAYGYMWA 536
               + L +  + L A+   LD   +W+L    G P +  A +V +L   G V  G++ A
Sbjct: 475 ESPDAVLAQIGRALAAAAQALDEAVDWLLAH-DGQPAQCAAGAVPFLRLAGTVIGGWLSA 533

Query: 537 LMARAA----LAGEGDAPFYSGKLGTARFYFARLLPRVDSLVASVKAGSESLYLLDAEQ 591
            MA AA     AG GDA F   K  TA  Y A +L +   L   V  G+ S   L  +Q
Sbjct: 534 RMAEAATAQLAAGAGDAGFLGTKRATASHYAAHVLVQAPMLRDIVTGGAASTLALADDQ 592