Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

Subject, 598 a.a., Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8) from Variovorax sp. SCN45

 Score =  610 bits (1573), Expect = e-179
 Identities = 320/597 (53%), Positives = 406/597 (68%), Gaps = 10/597 (1%)

Query: 1   MADYKAPLRDMRFVLNEVFNVAEQWTQLPGLAEVVDADTAMAVLEEAGKVTARTIAPLSR 60
           M  Y  P+RDM+FVL+EV NV E+   LP  AE  DADT  AV+EEAGK  A    PL+ 
Sbjct: 1   MPTYNPPVRDMQFVLHEVLNVTEELKALPAHAET-DADTINAVIEEAGKFAAEVTFPLNI 59

Query: 61  AADEEGCHWDNGA--VRTPAGFIEAYNTYAEGGWVGVGGDPLFGGMGMPKAISAQVEEMV 118
           + DEEGC  D     V+TP GF +AY  Y EGGW  +  DP FGG G+P  ++  + EM+
Sbjct: 60  SGDEEGCTLDKATHEVKTPKGFKDAYAKYVEGGWPALSCDPAFGGQGLPFVVNQCLFEML 119

Query: 119 NASSLAFGLYPMLTAGACLSINAHASEALKEKYLPNMYAGVWAGSMCLTEPHAGTDLGII 178
           N+++ A+ +YP L+ GA  ++ AH +E  K+ YLP + +G W G+MCLTEPH GTDLG++
Sbjct: 120 NSANQAWTMYPGLSHGAYEALAAHGTEEQKKTYLPKLTSGEWTGTMCLTEPHCGTDLGLL 179

Query: 179 RTKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFLV 238
           RTKAEPQADG+Y+++G+KIFI+ GEHD+T+NIIHLVLA+LPDAP G KGISLF+VPKF V
Sbjct: 180 RTKAEPQADGTYRITGSKIFISAGEHDMTDNIIHLVLARLPDAPKGSKGISLFVVPKFKV 239

Query: 239 NEDGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKGLAAMFTMMNYERL 298
             DGSLG RNP  C  +EHKMGI  +AT  +  + A G +VGEPNKGLAAMF MMN  RL
Sbjct: 240 KADGSLGERNPIFCAGLEHKMGIHGNATAQIVIEGATGTLVGEPNKGLAAMFVMMNAARL 299

Query: 299 GVGIQGLASAERSYQNAVEYARDRLQSRAPAGPQAKDKAADPIIVHPDVRRMLLTMKALI 358
           GVG Q L   E +YQNA+ YA+DR+Q R+ +G +AKDK ADPIIVHPDVR+MLLT KA  
Sbjct: 300 GVGNQSLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKEADPIIVHPDVRKMLLTAKAYA 359

Query: 359 EGGRAFSTYVAMQLDSAKYSEDASVRKRSEELVALLTPVAKAFLTDLGLECAVHGQQVFG 418
           EGGRA   +  + LD      D  VRK S ELVALLTP+ KAF+TD G        QVFG
Sbjct: 360 EGGRALQIFCTLLLDKEHNHPDEKVRKDSGELVALLTPIVKAFITDNGHISTNACMQVFG 419

Query: 419 GHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYYKLFSDEIRQFI-- 476
           GHG+I+EWG EQ VRD RI  IYEGTN IQ+LDL+GRKV+ + GA  K F   + + +  
Sbjct: 420 GHGFIKEWGMEQFVRDNRINMIYEGTNTIQSLDLLGRKVLGNNGASLKKFGKLVGKLVEE 479

Query: 477 TGAGSELDEFAKPLGASLDQLDGLTEWVLQQAKGNPNEIGAASVEYLHAFGYVAYGYMWA 536
            G   ++ EF  P+    DQL   T  +  +   NP+E+GAA+V+YL   G+  +GY++A
Sbjct: 480 EGVNEKMAEFINPIAGLGDQLTKFTTEIGFKGFQNPDEVGAAAVDYLRVAGHFVFGYLFA 539

Query: 537 LMARAAL----AGEGDAPFYSGKLGTARFYFARLLPRVDSLVASVKAGSESLYLLDA 589
            MA+ AL    AG  D PFY  KL TARFYFA+L P   +L+ + +AGS+ L   DA
Sbjct: 540 RMAQVALREIAAGNND-PFYVAKLQTARFYFAKLFPETATLMRTARAGSKVLMDTDA 595